| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1502 |
|---|
| Symbol | |
|---|
| ID | 8088232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 1783424 |
|---|
| End bp | 1785613 |
|---|
| Gene Length | 2190 bp |
|---|
| Protein Length | 729 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644835587 |
|---|
| Product | ferrichrome outer membrane transporter |
|---|
| Protein accession | YP_002987124 |
|---|
| Protein GI | 242238943 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAACTA CGTGTACTTT CTCTTTTGAT CCTGGTTGCT CCGCTTTGTC GCGGCGTGGA
TATTTGGCCA TTATGATTTC GGCTGCGTTA GGGAGTGTCT CTTCGGTAGC ACTCGCCGCA
GAGGAAACGA TTACCGTTGA AGCGTCGGCG GCTACGAAGG AAGACGCTTG GGGGCCGGCG
CCAACTATCG TCGCCAAACG TAGCGCTACC GGTACGAAAA CCGATACGTC AATCGAGAAG
AACCCACAAT CCGTATCGGT CGTCACCAGT GAAGAGCTTC AGATCCGTCA ACCCGATACG
GTAAAAGATG CATTGGGCTA CACACCCGGT GTGTTTTCCG GTAACCGCGG CAGTTCCAAT
ACCTATGATG TGGTGAATAT CCGGGGATTC ACGTCGGTCA ATACTAACCA GTATTTGGAT
GGTCTTAAGC TACAGGGGGA TAACTACTCG GAAGCCGTCC TGGATCCCTA TATGCTTGAG
CGCGTTGAAG TATTGCGCGG GCCGGTTTCT GTCCTTTATG GCAAAACCAG CCCCGGTGGG
TTGGTTGCGC TGGTCAGTAA ACGTCCGACG GCCGAGACGA TCCGTGAAGT GCAGTTCAAA
ATGGGGACGG ATAATCTCTA TCAAACCGGG TTCGATTTTG GCGGCGCGCT GGATGATAGC
GGGGTGTATA CCTATCGGTT TACCGGTGTG GCGCGTAGCA GCGATGCGCA GCAGGATATG
GCCAAGGAAA AGCGTTATTC CATTGCGCCG TCATTTAGCT GGCAGCCTGA TCAGAACACT
ACATTTACCC TGTTAACGCA TTTCCAAAAT GATCCCTATA CCGGGTTCTA CGGGTGGTTG
CCGCGTCAGG GAACGGTGAA TCCGTATTTC GATGCCGATG GGCAGGCGCA TAAGCTGTCG
ACCTCCTTCA ATGAAGGGGA AGCGAGTAAT AAGCTTTCAC GTAACCAGAA AATGATCGGT
TACAGCGCGG AACACGCATT CAATGACACC TGGATCGTAA GACAGAACCT GCGTTACATG
CAGTTGGATT CCTATTATCG CGGCATTTAT GGCTCCGGTG TTTCCTCTTC TCAATCATAT
GTATTAGATC GCGCATCGGT TATTTCCCGT GAGCATCTGA ACAGCTTCAC GGTTGATAAT
CAGGCTCAGG CTGCATTCTC AACGGCGGAC GTCGAGCATA CCGTGCTGTT CGGCGTCGAT
TATATGCGTA TGCGCAATGA TATCGACGCC TATTTCGGCT CCGCTTCGTC GCTGGATATG
AGCAACCCCC TTTATGGGGA CGACACGATT CCTTCTGATT CGTTGTTTGC CTGGAAGTAT
TTGAATCGTC AGGAACAAAC GGGTTTTTAT ATACAGGATC AAGCGCAGTG GAAGCAGTGG
CTGTTGACGA TAGGCGGGCG TTATGACTGG TCGAAAACTT CGGCGCAAAA TCGTAATTCA
GGCTCGACCG AAGCCCGGAA CGATGGGCAA TTTACCTGGC GTGGTGGGAT CAACTACCTG
TTTGATAACG GCATAACGCC TTATTTTAGC TATAGCGAAT CGTTTGAACC GACATCGGGC
ACCAATGCTG ATGGGGGAAC GTTCAAACCT TCGTTGGGTA AACAATATGA AGTTGGGGTG
AAATATGCAC CGAAGGATCG GCCGGTTGTT CTGACGGCTG CCGTCTATAC CCTGACGAAG
AGTAATAATC TGACCACTGA TCTCTCTAAT CCGAGTTTCA GTATTCAGAC CGGGGAAATT
CGTGCCCAGG GTGTTGAGTT GGAAGCTAAA AGCGCATTAA ACCAGAATGT CAACATGACG
GCGGCTTATT CCCATGTTGA TGTGAAGTAC ACGCGGGATA ATGCTTTGCA AGGGAAGCGA
CCCTACCAGA TTCCTAATAA CCAGGCGTCC TTATGGCTGG ATTACACCTT CCGTGAAGCA
GCGCTTAGCG GGGTGAGTAT AGGATCAGGC GTCCGTTATA TCGGCAGTTC GTATGGCGAT
GCCGACAATT CTTTCAAAGT TGCGCCATAT GGTTTGCTTG ATGCGATGGT GAAATACGAT
CTGGCGCGAT TTGGCATGCC GGGATCCAGT ATTGGCGTCA ATGTGGAGAA TCTGTTGGAT
CGTCAATACG TTGCCAGTTG CTACTCAGAT TATGCCTGTT ATTGGGGCAG TGAACGTCGT
GTTACCGCCA CGGCGACATT CAGATTTTAA
|
|---|
| Protein sequence | MITTCTFSFD PGCSALSRRG YLAIMISAAL GSVSSVALAA EETITVEASA ATKEDAWGPA
PTIVAKRSAT GTKTDTSIEK NPQSVSVVTS EELQIRQPDT VKDALGYTPG VFSGNRGSSN
TYDVVNIRGF TSVNTNQYLD GLKLQGDNYS EAVLDPYMLE RVEVLRGPVS VLYGKTSPGG
LVALVSKRPT AETIREVQFK MGTDNLYQTG FDFGGALDDS GVYTYRFTGV ARSSDAQQDM
AKEKRYSIAP SFSWQPDQNT TFTLLTHFQN DPYTGFYGWL PRQGTVNPYF DADGQAHKLS
TSFNEGEASN KLSRNQKMIG YSAEHAFNDT WIVRQNLRYM QLDSYYRGIY GSGVSSSQSY
VLDRASVISR EHLNSFTVDN QAQAAFSTAD VEHTVLFGVD YMRMRNDIDA YFGSASSLDM
SNPLYGDDTI PSDSLFAWKY LNRQEQTGFY IQDQAQWKQW LLTIGGRYDW SKTSAQNRNS
GSTEARNDGQ FTWRGGINYL FDNGITPYFS YSESFEPTSG TNADGGTFKP SLGKQYEVGV
KYAPKDRPVV LTAAVYTLTK SNNLTTDLSN PSFSIQTGEI RAQGVELEAK SALNQNVNMT
AAYSHVDVKY TRDNALQGKR PYQIPNNQAS LWLDYTFREA ALSGVSIGSG VRYIGSSYGD
ADNSFKVAPY GLLDAMVKYD LARFGMPGSS IGVNVENLLD RQYVASCYSD YACYWGSERR
VTATATFRF
|
|---|
| |