| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1470 |
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| Symbol | |
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| ID | 8088198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 1740543 |
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| End bp | 1742687 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644835553 |
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| Product | general secretion pathway protein D |
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| Protein accession | YP_002987092 |
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| Protein GI | 242238911 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGGGCA AAGGGATAAT GAAACGTTGG GGTTGGCTGG GATTAACCGC TCTCCTGATA
AGTTCGACAT ACAGTTGGTC GGCTGAGTTT TCAGCCAGTT TCAAGGGCAC TGACATCCAG
GAGTTCATCA ATACCGTCAG TAAGAATCTG AATAAAACCG TGATTATCGA TCCGACCGTG
CGCGGAACCA TCACCGTGCG CAGCTACGAT ATGATGAACG AGGAACAATA TTACCAGTTT
TTCCTTAGCG TGCTGGATGT CTACGGGTTT TCCGTGGTGC CGATGGATAA CGGCGTGCTG
AAAGTCATCC GTTCCAAAGA CGCCAAATCC TCCTCCATTC CCGTCGCCAA CGATGAACAA
CCGGGGGTCG GCGATGAGCT GGTAACAAGG GTTGTGCCGT TGAATAACGT GGCGGCCCGC
GATCTCGCGC CGTTGCTGCG CCAACTCAAC GATAATGCCG GCGCCGGTAG CGTGGTGCAT
TATGAACCCT CCAATGTCCT GTTGATGACC GGCCGTGCCG CGGTGGTGAA GCGTTTGATG
GAAATCGTCA GCACGGTGGA TAAAACCGGC GATCGCAACG TCGTTACTAT CCCGCTGACG
TATGCCTCTG CGGACGACGT TGCCAAACTG GTCAACGATC TGAACAAAAC GGATGAAAAA
AATGCATTGC CCAGCACCAT GGTGGCCAAC GTGGTGGCCG ACAGCCGTAC CAACTCGGTA
GTGGTCAGTG GTGAAGATAA TGCGCGTCAG CGCGTAGTGG AAATGATCCA TCAGCTCGAC
CGCAAGCAGG TGGTGCAGGG CGGTACCAAG GTGATTTACC TCAAATATGC CAAAGCGCTG
GATCTGATCG AAGTGCTGGC GGGTAACGGA ACCAGTGGCA ACCGTAATTC ATCGTCAACC
AACAATCGTT CCTCGTCGAC CCGATCGGGC AGCAGCTCCA GCAATAGCAG TTCCAGTAGC
TCCAGCAGTT CCAGCAATTC GTCATCTTCT TCCAACGCCG GTAATGGGGC GTACTCCTCG
TCCGGTTCCG GCATGGGGTT TGGTTCCACG TTCGGTTCCA GCAGCAGTTC CGGCGGTCGC
ACCATTATTA TTCAGGGCAA AGAAGTGATC ATGCGGGCGC ATGATCAGAC CAACTCTCTG
ATTATCACTG CACCACCCGA TATCATGCGT GACCTGGAAC AGGTCATTAA CCAACTGGAT
ATTCGCCGTC CTCAGGTGTT GGTTGAGGCG ATTATCGCCG AAGTCCAGGA TGCAGATGGC
CTCAATCTGG GGATTCAGTG GGCTAACAAA CGCGCGGGGA TGACGCAATA CACCAACACG
GGAATGCCGA TTTCCACCGC GATTGTTGGG GTCGACCAAT ACCGGGATGA CGGTACGCTG
ACCAGTAATT TCTCCAGTGC GCTCGGTAGT TTCAACGGCA TTGCCGCTGG TTTCTATCAC
GGTAATTGGT CGATGTTGCT GACGGCGTTG TCCAGCAATA GCAAAAACGA TGTACTGGCG
ACCCCGAGCA TTGTGACGAT AGACAATATG GAAGCCACCT TCAATGTGGG TCAGGAGGTT
CCAGTATTGA CCGGATCCCA GACGACCTCG GCGGATAACA TCTACAGTAC GGTGGAACGT
AAGACCGTCG GCATCAAGCT GAAAGTAAAA CCACAGATCA ATGAAGGTGA TTCCGTATTG
CTGCAAATAG AGCAAGAGGT TTCCAGCGTG GCGGATTCTT CCAGCAGTAC CAGCAGCGAT
CTTGGCGCTA CGTTTAATAC CCGTACCGTC AATAATGCGG TTATGGTGAC GAATGGTGAA
ACCGTGGTCG TCGGTGGATT GCTGAACAAA TCTACGGTCG AAACGGACAG CAAGGTGCCT
TTACTGGGTG ACATTCCGGT GTTGGGCAAT CTGTTCCGTT CGAAGAGCCT CACCGTATCC
AAACGCAACC TGATGCTGTT CCTGCGTCCA ACGATCATCC GCGACCGTCA GCAATATCAG
GCTACATCGA TCAACCAGTA CAAAGCGTTC GACAGCGAAC AGGATCTGCA GCGCAGCAAC
AAGGTTTTGG ATAGCAATAC GTTGCGTCTG CCATCTGGAG GCAATACCTA TACCTTCCGT
CAGGTGCAGT CGGCGATTGG CTCGTTCTAC TCGGAGGGGC GATGA
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| Protein sequence | MLGKGIMKRW GWLGLTALLI SSTYSWSAEF SASFKGTDIQ EFINTVSKNL NKTVIIDPTV
RGTITVRSYD MMNEEQYYQF FLSVLDVYGF SVVPMDNGVL KVIRSKDAKS SSIPVANDEQ
PGVGDELVTR VVPLNNVAAR DLAPLLRQLN DNAGAGSVVH YEPSNVLLMT GRAAVVKRLM
EIVSTVDKTG DRNVVTIPLT YASADDVAKL VNDLNKTDEK NALPSTMVAN VVADSRTNSV
VVSGEDNARQ RVVEMIHQLD RKQVVQGGTK VIYLKYAKAL DLIEVLAGNG TSGNRNSSST
NNRSSSTRSG SSSSNSSSSS SSSSSNSSSS SNAGNGAYSS SGSGMGFGST FGSSSSSGGR
TIIIQGKEVI MRAHDQTNSL IITAPPDIMR DLEQVINQLD IRRPQVLVEA IIAEVQDADG
LNLGIQWANK RAGMTQYTNT GMPISTAIVG VDQYRDDGTL TSNFSSALGS FNGIAAGFYH
GNWSMLLTAL SSNSKNDVLA TPSIVTIDNM EATFNVGQEV PVLTGSQTTS ADNIYSTVER
KTVGIKLKVK PQINEGDSVL LQIEQEVSSV ADSSSSTSSD LGATFNTRTV NNAVMVTNGE
TVVVGGLLNK STVETDSKVP LLGDIPVLGN LFRSKSLTVS KRNLMLFLRP TIIRDRQQYQ
ATSINQYKAF DSEQDLQRSN KVLDSNTLRL PSGGNTYTFR QVQSAIGSFY SEGR
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