| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1358 |
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| Symbol | |
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| ID | 8087920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | - |
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| Start bp | 1551745 |
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| End bp | 1553802 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644835439 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002986982 |
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| Protein GI | 242238801 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACCCC CAGAATGGCG TTCGGATAGC CTGTTTCAGG CAATCCTTGA CCGCTGTCCC
GTCGGCATTG CCGTTATTGA CTACAGTGGT AATTACCTGA CGGTCAACCC GGCCTATTGC
AATATTTATG GTTATACGCA ACAGGAGATG CTCCATCGCA GCTTCACGAT GGTGTTTCCC
CCGGAGGCGC AGGGTTCAGT GTTGGAACGC CACCAGCGTT TTTTGGACGA AGGCGGCAAA
CTGGGCGGTG AATGGACAGT GACACGCCGG GACGGCACAT TGCTGACCGT CTGGTCTGAA
TCGGTGCCTT TCGCACAGGC CGGGCACAAA GCCGACAGGC TGGTGTACGT GCTCGACATC
AGCGAACGCA AGAAGACGCA CGAACAACAG CAGATTGCCG CCGCCGTCTA CGACGCCAGC
CATGAAGCCA TTTTCGTCAC CGATGCCGAT AACAATATCA TCTCCGTCAA TCCGGCCTTC
TCCCGTCTGA CCGGCTATCA CTTTGACGAC GTGAACGGCA AAAACCCGCG GATGTTCAAA
TCCAGCCGCC ATCCGCCGTC TTTCTACGCC GAGATGTGGC ACGCGCTGCA TGAGAAAGGG
TTGTGGATCG GCGAGGTCTG GGATCGGCAT AAAAACGGTC ACGATTACCT CAAAGAGTTG
ACCGTCACGG TCATCCGGGA TGCCGCCGGC CATATCATTA ACCATGTCGG CATGTTTTCC
GATATCACCC TGCGCAAGAA GCAGGAGGAA CTGATTTGGC GACAGGCCAA CTACGACGCC
ATCACCGACC TGCCGAATCG TCATTTGTTT CAAAGCAAAC TGGAGCAGGC GGCGCAACAC
GCCCGACGCA CCGGCAATCT CATGGCGCTG ATGCTGATTG ACCTCGACCA CTTCAAAGCC
GTCAACGACA GCATGGGGCA TCGGGCGGGC GATATGCTGC TAACCCGGGT ATCGCAACGG
CTCATCGACA GCGTGCAGCA CGCCGATACC ATCATCGCCC GGCTCGGCGG CGACGAATTC
GCCGTCATCA TTTCCGATCT GTTCCAACCC CATGATTGCG ACGCCCTCGC CAAAGCGCTG
CTGGAGAATC TCTCCCACCC CTTCAATATC GACGGTGAGA ATATGTTCGT ATCGGCAAGC
ATCGGCATCG CCTGCTTCCC GACCGACAGC GACAACCTCG AAGCGCTGTT CAAAAATGCC
GATCAGGCAA TGTACGCCGC CAAGAACGCC GGTCGCAACG GCTTCAGTTA CTACAGCCCC
GCGCTACATG ACGCGGCGCG CACCCGGCTA CGCATGACCA ATGATCTGCG CAAAGCGATC
CGGGAAGAGC AGTTCGAGGT CTATTATCAG CCGATTGTTG CGCTGGACAC CGGCCATATC
ACCAAGGCGG AGGCGCTGGT GCGTTGGCAT CATCCCACGC ACGGGCTGGT CAGCCCGGCG
GAATTCATCC CGCTGGCGGA AGAGACCGGG ATCATTATTC CTTTAGGCAA TTGGGTGGCC
CGGCAAGCGA TCGCCCAGTT GGCGCGCTGG CGTCAGTTCT GCGATCCCCG TTTCCAGATG
ACCATCAACC TGTCGCCGAT ACAACTGCGC AGCCAGGACT TCGCCGACAT GGACTGGTTG
CGCGAGCTGG ATCGCCATGG GCTGAGCGGC GATGCGATCG CCATCGAAAT TACGGAAGGA
TTGCTGCTGA ATGCCGAACC CCGGGTCAAT CGCAACCTGC ACATGTTCCG CGACGCCGGC
ATCCAGATCG CCATTGATGA TTTCGGCACC GGCTATTCAT CGCTGGCCTA CCTGAGGAGA
TTCAATATCG ATTATCTAAA AATCGACCGC TCCTTCATTG AGGATATGGA CGGCGTCGGC
CATGAGCTGT GCGTCGCCAT TGTCGCCATG GCGCACAGCC TGGGGTTACA GGTAGTCGCA
GAAGGGGTGG AAACCCTCCA GCAGAGCGCC ATGCTCAAGC GCATCGGCTG CGATTATGCC
CAGGGTTTTC TGTTTTCCCG CCCGCAGTCT GCGGCGGATA TTACCCAACT GCTGCCGACA
GCGCCCAGCC TGCCCTAA
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| Protein sequence | MQPPEWRSDS LFQAILDRCP VGIAVIDYSG NYLTVNPAYC NIYGYTQQEM LHRSFTMVFP
PEAQGSVLER HQRFLDEGGK LGGEWTVTRR DGTLLTVWSE SVPFAQAGHK ADRLVYVLDI
SERKKTHEQQ QIAAAVYDAS HEAIFVTDAD NNIISVNPAF SRLTGYHFDD VNGKNPRMFK
SSRHPPSFYA EMWHALHEKG LWIGEVWDRH KNGHDYLKEL TVTVIRDAAG HIINHVGMFS
DITLRKKQEE LIWRQANYDA ITDLPNRHLF QSKLEQAAQH ARRTGNLMAL MLIDLDHFKA
VNDSMGHRAG DMLLTRVSQR LIDSVQHADT IIARLGGDEF AVIISDLFQP HDCDALAKAL
LENLSHPFNI DGENMFVSAS IGIACFPTDS DNLEALFKNA DQAMYAAKNA GRNGFSYYSP
ALHDAARTRL RMTNDLRKAI REEQFEVYYQ PIVALDTGHI TKAEALVRWH HPTHGLVSPA
EFIPLAEETG IIIPLGNWVA RQAIAQLARW RQFCDPRFQM TINLSPIQLR SQDFADMDWL
RELDRHGLSG DAIAIEITEG LLLNAEPRVN RNLHMFRDAG IQIAIDDFGT GYSSLAYLRR
FNIDYLKIDR SFIEDMDGVG HELCVAIVAM AHSLGLQVVA EGVETLQQSA MLKRIGCDYA
QGFLFSRPQS AADITQLLPT APSLP
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