Gene Dd703_1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1304 
Symbol 
ID8087866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp1491454 
End bp1492872 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content59% 
IMG OID644835385 
Productputrescine--2-oxoglutarate aminotransferase 
Protein accessionYP_002986928 
Protein GI242238747 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID[TIGR03372] putrescine aminotransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000448411 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCCAGAT CAACGTCACA TTTCACCCCG CTAGAGTCTT CTCAGCAGGC ACTTGAATGG 
ATTATGAGCG ATACATTATC GCCAGACGCC ATGAACACGC TCAGTCTTGA CACCCTCCAC
GCCTTCCGCG ATTACGTCAA TCCTGGTTTT CTTGAATACC GTAAGTCGGT GACTGCCGGC
GGGGGCTATG GCGCCGTCGA ATGGCGCGCC AGCGGCCCGA ATACCTTACT GGATGTTCAG
GGTAACGAAT ACCTCGATTG CCTGGGCGGC TACGGCATCT TTAACGTTGG ACACCGTAAC
CCCACCGTGG TGGCCGCAGT GGAAAAACAG TTGTCCAAAC AACCGCTGCA CAGCCAGGAA
CTGCTGGATC CGCTGCGTGC CCTGCTGGCG AAAACGCTGG CGGCGCTCAC GCCCGGCAAC
CTGAAGTACA GTTTTTTCAG CAACAGCGGC ACCGAATCGG TGGAAGCGGC GCTGAAACTG
GCGAAAGCTT ACCAGTCGCC GCGCGGGCGG TTCAGCTTTA TCGCTACGCA TGGCGCTTTC
CACGGCAAAT CGTTGGGCGC GCTTTCCGCC ACCGCCAAAC CGATGTTTCG TCGTCCGTTT
ATGCCGCTGG TGCCGGGATT TCACCATGTC CCGTTCGGCG ATATCGATGC GATGAAGCAG
CAGATTGTGC AGTGTCAACG CAATGGCGAA GGCATCGCCG CCGTGATCCT GGAACCGATT
CAGGGCGAAG GCGGCGTCAA CTTGCCGCCA CAGCACTATC TGCCGGCGGT GCGGGCATTG
TGTGATGAGA CTGGCGCGCT GTTGATTTTG GATGAAGTAC AGACCGGCAT GGGGCGCACC
GGTAAGATGT TTGCCTGTGA ACACTATGGC GTCGAGCCGG ATATTCTGTG TCTGGCGAAA
GCGCTGGGCG GCGGCGTGAT GCCGATCGGC GCCACCGTGG CGACGGAAGA GGTCTTCTCG
GTGCTGTTCG ACAACCCGTT TCTGCATACC ACCACCTTCG GCGGTAATCC GATGGCATGT
GCGGCGGCGC TGGCGACCAT CAACGTGTTA TTGCGCGACA AGCTGCCTGA ACAGGCCGCC
CGTCAGGGGG CGTTCCTGCT TTCCGGCCTG CAACGGCTGG CGGCGGCGTA CCCGGACTTG
ATTGTAGAAG CACGCGGACT GGGGCTGTTG CAGGCCATCG AGTTCCGCGA AAACGAAATC
GGCTATGCGT TTGCCAGCGA GCTGTTCCAG CGCCGCGTGC TGGTGGCTGG CACGTTGAAC
AACGCGAAGT CAATCCGTAT CGAACCCCCA TTAACCATCA CCCACGAGCA GTGTTGTCGC
GTATTGCAGG AAGCAGATCG CGCACTGGCG AAGCTGAGGG CGGTGCAGGT GGAGGATGCC
AAACCTAAAC CCATCAACAT GGAATTTGCG CTACAGTGA
 
Protein sequence
MSRSTSHFTP LESSQQALEW IMSDTLSPDA MNTLSLDTLH AFRDYVNPGF LEYRKSVTAG 
GGYGAVEWRA SGPNTLLDVQ GNEYLDCLGG YGIFNVGHRN PTVVAAVEKQ LSKQPLHSQE
LLDPLRALLA KTLAALTPGN LKYSFFSNSG TESVEAALKL AKAYQSPRGR FSFIATHGAF
HGKSLGALSA TAKPMFRRPF MPLVPGFHHV PFGDIDAMKQ QIVQCQRNGE GIAAVILEPI
QGEGGVNLPP QHYLPAVRAL CDETGALLIL DEVQTGMGRT GKMFACEHYG VEPDILCLAK
ALGGGVMPIG ATVATEEVFS VLFDNPFLHT TTFGGNPMAC AAALATINVL LRDKLPEQAA
RQGAFLLSGL QRLAAAYPDL IVEARGLGLL QAIEFRENEI GYAFASELFQ RRVLVAGTLN
NAKSIRIEPP LTITHEQCCR VLQEADRALA KLRAVQVEDA KPKPINMEFA LQ