Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_1278 |
Symbol | |
ID | 8087840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 1460649 |
End bp | 1461440 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644835359 |
Product | NADH ubiquinone oxidoreductase 20 kDa subunit |
Protein accession | YP_002986902 |
Protein GI | 242238721 |
COG category | [C] Energy production and conversion |
COG ID | [COG3260] Ni,Fe-hydrogenase III small subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.499713 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTATGT TGCCTAACGG TGCCGACCAC TACCGCACCA CGCCGATCAC GTTGGATGAA CAAACCCAAC AATTGAAAAA AACGCTGCTG AAGGATATCC AGCGTTCCGC GTATGTCTAC CGCGTGGACT GCGGCGGTTG TAACGGCTGC GAGATCGAGA TCTTCTCCGC CATTACCCCG CTGTTCGACG CCGAGCGTTT CGGCATCAAG GTGGTGGCCT CGCCGCGCCA CGCCGACATT CTGCTGTTCA CCGGCGCGGT CACGCGCGCT ATGCGCACCC CGGCGCTGCG CGCCTACGAA TCGGCGCCGG ATCCGAAAAT CTGCATCTCC TACGGTGCGT GCGGTTGTGG CGGCGGCATC TTCCACGATC TGTACTGCGT GTGGGGCGGC AGCGATAAAA TCGTGCCGAT CGACGTGTAT ATCCCCGGCT GTCCGCCGAC GCCGGCGGCG ACCATTTACG GGTTCGCCGT GGCGCTGGGC CTGCTGGAGC AGAAGCTGCA CGGTCAAAGC CACCAGCAGG GCGAGGACGA AAAAGCCGCG CTGATCCACC CCGACGTACC GCCCGATCTG CGGGTACTGC TGGAGCGCGA AGCCCGGCGG ATGGCGGGTT ATCGTCAGGG CCGCGAAATC AGCGACCGGT TTCTGGGGCT ACTGGAAAAC CAGCCGCTGG CCGGGTTTGA ACAACGGGTG GACAGCTGGC TGCAACAGCA TAACGACCCG CGCCTGACGG AGATCGTCGG CCAGCTGTTG CAGATCTACC AAGCGATGCT GAGCGGAGCG ATCGTCCGAT GA
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Protein sequence | MSMLPNGADH YRTTPITLDE QTQQLKKTLL KDIQRSAYVY RVDCGGCNGC EIEIFSAITP LFDAERFGIK VVASPRHADI LLFTGAVTRA MRTPALRAYE SAPDPKICIS YGACGCGGGI FHDLYCVWGG SDKIVPIDVY IPGCPPTPAA TIYGFAVALG LLEQKLHGQS HQQGEDEKAA LIHPDVPPDL RVLLEREARR MAGYRQGREI SDRFLGLLEN QPLAGFEQRV DSWLQQHNDP RLTEIVGQLL QIYQAMLSGA IVR
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