Gene Dd703_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1278 
Symbol 
ID8087840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp1460649 
End bp1461440 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content63% 
IMG OID644835359 
ProductNADH ubiquinone oxidoreductase 20 kDa subunit 
Protein accessionYP_002986902 
Protein GI242238721 
COG category[C] Energy production and conversion 
COG ID[COG3260] Ni,Fe-hydrogenase III small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.499713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATGT TGCCTAACGG TGCCGACCAC TACCGCACCA CGCCGATCAC GTTGGATGAA 
CAAACCCAAC AATTGAAAAA AACGCTGCTG AAGGATATCC AGCGTTCCGC GTATGTCTAC
CGCGTGGACT GCGGCGGTTG TAACGGCTGC GAGATCGAGA TCTTCTCCGC CATTACCCCG
CTGTTCGACG CCGAGCGTTT CGGCATCAAG GTGGTGGCCT CGCCGCGCCA CGCCGACATT
CTGCTGTTCA CCGGCGCGGT CACGCGCGCT ATGCGCACCC CGGCGCTGCG CGCCTACGAA
TCGGCGCCGG ATCCGAAAAT CTGCATCTCC TACGGTGCGT GCGGTTGTGG CGGCGGCATC
TTCCACGATC TGTACTGCGT GTGGGGCGGC AGCGATAAAA TCGTGCCGAT CGACGTGTAT
ATCCCCGGCT GTCCGCCGAC GCCGGCGGCG ACCATTTACG GGTTCGCCGT GGCGCTGGGC
CTGCTGGAGC AGAAGCTGCA CGGTCAAAGC CACCAGCAGG GCGAGGACGA AAAAGCCGCG
CTGATCCACC CCGACGTACC GCCCGATCTG CGGGTACTGC TGGAGCGCGA AGCCCGGCGG
ATGGCGGGTT ATCGTCAGGG CCGCGAAATC AGCGACCGGT TTCTGGGGCT ACTGGAAAAC
CAGCCGCTGG CCGGGTTTGA ACAACGGGTG GACAGCTGGC TGCAACAGCA TAACGACCCG
CGCCTGACGG AGATCGTCGG CCAGCTGTTG CAGATCTACC AAGCGATGCT GAGCGGAGCG
ATCGTCCGAT GA
 
Protein sequence
MSMLPNGADH YRTTPITLDE QTQQLKKTLL KDIQRSAYVY RVDCGGCNGC EIEIFSAITP 
LFDAERFGIK VVASPRHADI LLFTGAVTRA MRTPALRAYE SAPDPKICIS YGACGCGGGI
FHDLYCVWGG SDKIVPIDVY IPGCPPTPAA TIYGFAVALG LLEQKLHGQS HQQGEDEKAA
LIHPDVPPDL RVLLEREARR MAGYRQGREI SDRFLGLLEN QPLAGFEQRV DSWLQQHNDP
RLTEIVGQLL QIYQAMLSGA IVR