Gene Dd703_1199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1199 
Symbol 
ID8087760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp1369284 
End bp1371083 
Gene Length1800 bp 
Protein Length599 aa 
Translation table11 
GC content58% 
IMG OID644835281 
Productputative assembly protein 
Protein accessionYP_002986825 
Protein GI242238644 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2982] Uncharacterized protein involved in outer membrane biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAGAT TATTTACCGC CCTGATTATT TTGCTGGTGG TGCTGGCGGC GGGGATGTCC 
GCCCTGGTGT TGCTGATAAA CCCGAATGAT TTTCGGGATT ATATGGTGCG TCAGGTGGAA
GCGAGAACCG GATACCGGCT GACGCTATCG GGCGAGCTGC GTTGGCACGT TTGGCCGCAA
CTGAGCATCC TGTCCGGCGG CATGTCGCTG AGTGCGCCGG GCGCCGCCGT TCCGGTCGTC
AGCGCGGAGA ATATGCGGCT GGATGTGAAG CTGTGGCCGC TGTTGTCGCA CCAGCTGGAA
ATCAGGCAGG TCATGCTCAA AGACGCCGTG GTGCGGTTGA CGACGGAGAG CGAAGCCCGG
AAGGCCGCAT CGGTGCCGAT CGCGCCGGCA GGTTCGCCCG AACCGGAAAC CGACAGCCGC
TGGCATTTTG ATCTTGGCCG CGTTGAGATT GTCGACAGCT TGCTGGTGTT TCAGCGCGGC
GATTCGCCCC CCATCAATGT GCGGGATATC AATCTGACGA TGGAGAGCGT CGGGCAGCGT
CAGGTGCAAG CGGCATTTTC CAGCCGCATT AATCGCGATC AGCGGGAACT CTCTTTCGCG
ATGAAAGCAC GGCTTGATAT GCAGGCCTAC CCGCAGCAAG TGGCGATGAA TATCGCGTCG
TTGGATTATC AGTTGCAGGG GGCTGGCGTC CCTCCGGAAG GGATCCGCGG TCAGGGTTCG
ATGCAGGTGA ATTACCAGCG TCAGCCGGAA AGCGTGACGA TCGGGTCGTT TTCTCTGACG
GCCAACAACA GTGCATTAGT GGGCTCTGCC AGCGCGGTGT TGGGGGCGGT TCCCGATTAT
CAGTTGACGT TGAAATCGGA GCGACTCGAT GTCGATACGC TGCTGGGGTT GACCCAGAAA
GCGGATGGGG ATGCCGGCAA GGCCGACAAG ACGACGGCGG CGCCGGTCAT TTCCCGTGAG
CAGACCACCG AACCTGATCA GGCGTTGCGG GATTTCCGCG CTCGGGTGGC GGTGGCGGCG
GACAAACTGA TCTATCGCGG CGTCACTGTC GATCAGTTCA ATCTGCAAGG CGACAATCAG
CGCGGCAAGC TTGACGTGAG TGATTTTAGT GGCCGGTTGG GCGACGGGCG CTTCTCGTTG
CCGACAACGC TGGAGATAGG AAGGGTGCCG GCTATCATCG TCTCGCCACT GTTGCAGAAT
ATTGAGGTGT CGCAGGTGCT GCATATCCTG GGGCTGCCGG ATAGCCTGAG CGGTCGTCTC
AGTCTGCAAG GGAGTTTAAG CGGTGATGCG TTGTCGCTGG CGGCATTGAT TTCTCAATGG
CGGGGTAAAG GGTCGGTACA GATTGAGCAG TTGAGATTGC CGGTGCTGAA TATCCAACAA
CTGATTCAGC AGGCTGTTGC GCGTAATAAT GTCGGGGTGC AGGGACAGGA CAGCTATTCC
CGTTTCACCG AAATCCGGCA TATCGGTGCG CAGGCGGTAT TAAACCGTGG TCAATTGCAG
TTGCAGGATG TGTCCGGCGA GTCCGACATT TTAGCGTTGA CGGGGTCTGG TCAATTTGAT
TTGCCGGCTC AGCAGTGCGA TATCAATCTG GATGTCAAGG TGATGAAGGG ATGGGCCGGC
GATGAGCAAA TGGTGCAAAT GCTACAGGAT ACGGCGATCC CTTTCCGCTT ATACGGCGAT
ATCAACAATC TGAATTACCA GCTCCAGGTG GATCAACTGG TACGCAAGCG TTTACAGGAT
GAGTTGAAAA AACGTCTGGG CGAGTGGTCC GAGCGGATTC AACAGCCTTC CAAAGGCTAG
 
Protein sequence
MRRLFTALII LLVVLAAGMS ALVLLINPND FRDYMVRQVE ARTGYRLTLS GELRWHVWPQ 
LSILSGGMSL SAPGAAVPVV SAENMRLDVK LWPLLSHQLE IRQVMLKDAV VRLTTESEAR
KAASVPIAPA GSPEPETDSR WHFDLGRVEI VDSLLVFQRG DSPPINVRDI NLTMESVGQR
QVQAAFSSRI NRDQRELSFA MKARLDMQAY PQQVAMNIAS LDYQLQGAGV PPEGIRGQGS
MQVNYQRQPE SVTIGSFSLT ANNSALVGSA SAVLGAVPDY QLTLKSERLD VDTLLGLTQK
ADGDAGKADK TTAAPVISRE QTTEPDQALR DFRARVAVAA DKLIYRGVTV DQFNLQGDNQ
RGKLDVSDFS GRLGDGRFSL PTTLEIGRVP AIIVSPLLQN IEVSQVLHIL GLPDSLSGRL
SLQGSLSGDA LSLAALISQW RGKGSVQIEQ LRLPVLNIQQ LIQQAVARNN VGVQGQDSYS
RFTEIRHIGA QAVLNRGQLQ LQDVSGESDI LALTGSGQFD LPAQQCDINL DVKVMKGWAG
DEQMVQMLQD TAIPFRLYGD INNLNYQLQV DQLVRKRLQD ELKKRLGEWS ERIQQPSKG