| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1142 |
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| Symbol | sdhA |
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| ID | 8087703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 1306290 |
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| End bp | 1308059 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644835224 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_002986769 |
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| Protein GI | 242238588 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.881943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAATT TGCCAGTCAG AGAGTTTGAT GCCGTTGTTG TTGGCGCGGG TGGCGCGGGT
ATGCGCGCCG CGCTTCAGAT TTCCCAGATG GGCTTGTCCT GTGCCCTGTT GTCCAAAGTA
TTCCCGACCC GTTCCCATAC GGTATCCGCC CAGGGGGGAA TTACTGTTGC TTTGGGCAAT
ACCCATGAGG ACAATTGGGA ATGGCATATG TATGACACCG TAAAAGGGTC TGACTACATC
GGTGATCAGG ACGCCATTGA ATATATGTGC AAAACGGGGC CGGAAGCGAT TCTGGAACTG
GAACATATGG GATTGCCGTT TTCCCGCTTG GATGATGGGA GTATTTACCA GCGCCCGTTC
GGCGGCCAGT CTAAGAATTT CGGCGGCGAG CAGGCTGCTC GCACTGCGGC GGCGGCAGAC
CGTACTGGGC ACGCGCTGTT GCATACGCTT TATCAGCAGA ACCTTAAAAA TCACACCACC
ATCTTTTCTG AATGGTATGC GCTTGATCTG GTGAAAAATC AGGATGGTGC GGTGGTGGGA
TGTACCGCCA TCTGTATTGA AAGCGGCGAA GTCGTTTATT TCAAAGCTCG TGCCACCGTA
TTGGCGACCG GCGGGGCCGG GCGCATCTAT CAGTCAACGA CCAATGCGCA TATCAATACC
GGTGACGGTG TGGGTATGGC GCTGCGTGCA GGTGTGCCGG TTCAGGATAT GGAAATGTGG
CAGTTCCATC CTACGGGGAT CGCTGGCGCT GGGGTACTGG TAACGGAAGG GTGCCGTGGT
GAAGGCGGTT ACTTGCTTAA CAAACATGGC GAGCGTTTTA TGGAGCGCTA TGCGCCAAAC
GCCAAAGATT TGGCTGGGCG TGATGTGGTC GCTCGTTCCA TCATGATTGA GATTCGTGAA
GGCCGCGGAT GCGATGGTCC ATGGGGACCA CATGCCAAAC TGAAGCTGGA TCACCTTGGT
AAAGAAGTTC TGGAGTCTCG TTTGCCGGGT ATTTTGGAGT TGTCGCGTAC TTTTGCCCAT
GTTGATCCGG TCAAAGAGCC GATTCCGGTT ATTCCGACTT GCCACTATAT GATGGGCGGT
ATCCCGACGA AGGTCACTGG TCAAGCGTTG ACGGTGAATG AAAAAGGCGA AGACGTGGTG
ATTCCTGGTC TGTTCGCTGT GGGTGAGATT GCCTGCGTTT CTGTTCACGG TGCCAACCGA
CTGGGCGGCA ACTCGTTGCT TGACCTGGTA GTGTTTGGTC GTTCGGCAGG GATGCATCTG
CAGGAATCGT TGATTGAACA AGGCGTTTCC CGCGATGCCA GTGACTCGGA TATCGATGCA
TCCCTTGAGC GTCTTAACCG TTGGAACGAT AACCGTTCTG GCGAAGATCC GGTTGAAATT
CGCAAAGCAT TGCAGTCTTG TATGCAGAAT AACTTCTCGG TCTTCCGCGA AGGCGATGCG
ATGGCAAAAG GCCTTGAAGA GCTCAAAGTG ATTCGCGAAC GCCTGAAACA GGCTCGATTG
GATGATGCAT CAAGTGAATT CAATACCCAG CGTATTGAGT GCCTGGAGCT GGATAATCTG
ATGGAAACTG CATATGCCAC CGCGGTCTCT GCGAATTTCC GCACTGAGAG TCGTGGCGCG
CACAGTCGCT TCGACTATCC TGATCGTGAT GATGAGAATT GGTTGTGCCA TACGCTGTAT
CAGCCGCAAA CCGAGAGCAT GACGCGCCGT CAGGTGAACA TGCAGCCTAA ATTGCGCCCG
GCGTTTCCGC CGAAAGTGCG TACTTACTGA
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| Protein sequence | MMNLPVREFD AVVVGAGGAG MRAALQISQM GLSCALLSKV FPTRSHTVSA QGGITVALGN
THEDNWEWHM YDTVKGSDYI GDQDAIEYMC KTGPEAILEL EHMGLPFSRL DDGSIYQRPF
GGQSKNFGGE QAARTAAAAD RTGHALLHTL YQQNLKNHTT IFSEWYALDL VKNQDGAVVG
CTAICIESGE VVYFKARATV LATGGAGRIY QSTTNAHINT GDGVGMALRA GVPVQDMEMW
QFHPTGIAGA GVLVTEGCRG EGGYLLNKHG ERFMERYAPN AKDLAGRDVV ARSIMIEIRE
GRGCDGPWGP HAKLKLDHLG KEVLESRLPG ILELSRTFAH VDPVKEPIPV IPTCHYMMGG
IPTKVTGQAL TVNEKGEDVV IPGLFAVGEI ACVSVHGANR LGGNSLLDLV VFGRSAGMHL
QESLIEQGVS RDASDSDIDA SLERLNRWND NRSGEDPVEI RKALQSCMQN NFSVFREGDA
MAKGLEELKV IRERLKQARL DDASSEFNTQ RIECLELDNL METAYATAVS ANFRTESRGA
HSRFDYPDRD DENWLCHTLY QPQTESMTRR QVNMQPKLRP AFPPKVRTY
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