| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1109 |
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| Symbol | ubiF |
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| ID | 8087664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 1268760 |
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| End bp | 1269926 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644835185 |
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| Product | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase |
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| Protein accession | YP_002986736 |
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| Protein GI | 242238555 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.666485 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACTATG ATGCAGTGAT CGTCGGCGGA GGTATGGTAG GCGCCGCCGT GGCGTTGGGA
CTGGCGCAGA ACGGTTTTCA GGTCGCCGTC GTCGAGCAAG AAAGCCCGTC GCCGTTTGAA
CCGCAACAAG CACCGGATAT TCGTGTGTCG GCCATTGGCT GCGCATCGGT GGCGCTGTTG
CAACGGTTGG GGGTCTGGCC GCGCGTGGAA CGGATGCGCA GTGCGCCATA TCGGCGTCTG
GAAACCTGGG AATGGGACAA CGCGCAGGTT CGGTTCGACG CCGGCGATAT CGGCCTTTCC
GAACTGGGAT TCATGGTGGA AAACCGGGTG CTGCAACTGG CCCTGTGGCA GGCATTACAG
GAGACGGCGG GCGTTACGCT GTTATGCCCG TGGCAGCCGG ACGGTATGCG TTATGCCGAT
GGCTGCTGGC ATCTATCTGC CAGGAATGGC GAAACGATTG AGGCCGCATT GATTATTGGT
GCCGATGGCG CTAACTCCCA TATCCGGCAG TGGGCTGGGA TCGGCATTAC CGGCTGGCAA
TACCGGCAAT CCTGCATGCT GATTAGCGCC AGGACGAACG GCACCCAACA GGATGTTACC
TGGCAGCAGT TTACGCCCTC GGGGCCGCGT GCTTTCTTGC CGTTGTTTGA TGGTTGGTGT
TCGCTGGTGT GGTATGACAG TCCGCAGCGT ATTCGCCAAC TACAATCCAT GCCGTTGGCG
CAGTTGAACA GGGCCATCGC GGATACGTTT CCTTCCCGTT TGGGGGCGGT CGAAGCGGTA
GCCGCCGGTT CATTTCCTTT GGTTCGCCGT CATGCCCAGC GCTATGTACA ACCCGGACTG
GCCTTGGTGG GCGATGCTGC GCATACCATT AATCCGTTGG CGGGGCAGGG GGTGAATCTG
GGGTACCGGG ATGCAGAAGT ATTGCTGGAT GTTGTGGTCG AGGCGCGGGA TAGAGGGGAG
GCGTGGTATT CGGAATCGGT TCTTTGGCGC TATCAGCAAC GGCGCAAAGG GGACAATTTG
CTGATGCAAA GCGGAATGGA TCTGTTTTAC GGCGCGTTCA GCAACCGGAT CCCGCCGTTG
GTTTTCGCCC GTAATATGGC GTTGATGGCG GCGCAACGTG CCGGGAAACT GAAACAACAA
GCGCTGCGTT ATGCCTTGGG GCTGTAG
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| Protein sequence | MHYDAVIVGG GMVGAAVALG LAQNGFQVAV VEQESPSPFE PQQAPDIRVS AIGCASVALL
QRLGVWPRVE RMRSAPYRRL ETWEWDNAQV RFDAGDIGLS ELGFMVENRV LQLALWQALQ
ETAGVTLLCP WQPDGMRYAD GCWHLSARNG ETIEAALIIG ADGANSHIRQ WAGIGITGWQ
YRQSCMLISA RTNGTQQDVT WQQFTPSGPR AFLPLFDGWC SLVWYDSPQR IRQLQSMPLA
QLNRAIADTF PSRLGAVEAV AAGSFPLVRR HAQRYVQPGL ALVGDAAHTI NPLAGQGVNL
GYRDAEVLLD VVVEARDRGE AWYSESVLWR YQQRRKGDNL LMQSGMDLFY GAFSNRIPPL
VFARNMALMA AQRAGKLKQQ ALRYALGL
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