Gene Dd703_1060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1060 
Symbol 
ID8087615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp1220184 
End bp1221704 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content51% 
IMG OID644835136 
Productgalactose/methyl galaxtoside transporter ATP-binding protein 
Protein accessionYP_002986687 
Protein GI242238506 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGTG ATACTCTAAC CACTCAGCGC GAATTCCTGC TGGAGATGAC CAATATCAGT 
AAGTCGTTTC CCGGTGTAAA GGCATTGGAT AATGTCAACC TGAAGGTGCG CCCCCACTCT
ATCCATGCCC TGATGGGAGA AAACGGCGCA GGAAAATCGA CGCTACTGAA ATGTCTGTTC
GGCATTTATC AGAAAGATAC CGGTAGCATT CAATTCCAAG GGCAGGAGAT CGATTTCAAA
AGCGCGAAAG AAGCGCTGGA GAACGGCGTA TCCATGGTGC ATCAGGAATT GAACCTGGTT
TTGCAACGCT CAGTCATGGA TAACATGTGG CTCGGCCGTT ATCCCAAAAA AGGGTTGTTC
GTCGATCAGG AAAAAATGTA TCGCGACACC AAAGCCATTT TCGATGAACT GGATATCGAT
ATCGATCCGC GCGACAAAGT GGCCACACTG TCCGTGTCGC AGATGCAGAT GATCGAGATC
GCCAAAGCAT TTTCCTACAA TGCCAAAATC GTCATCATGG ACGAGCCCAC CTCGTCACTG
ACGGAAAAAG AGGTGAACCA TCTGTTCACT ATCATCCGTA AGCTGAAAGA CCGGGGCTGC
GGCATTGTTT ATATCTCCCA CAAAATGGAA GAGATCTTCC AGTTGTGCGA TGAAATCACC
GTCCTGCGTG ATGGTCAGTG GGTCGCGACG CAGCCGCTCG AAGGCCTGAA TATGGATCAG
ATCATCGCCA TGATGGTGGG CCGCTCGCTG ACCCAGCGTT TCCCGGAGAA AACCAACACC
CCCGGTGACG TGATGCTGGA AGTACGCGGT TTGACCTCAA TGCGTCAACC GTCTATCCGC
GATGTGTCGT TTGACCTGCG CCAGGGCGAG ATTCTGGGGA TTGCAGGTCT GGTCGGCGCC
AAACGTACCG ATATCGTCGA AACCCTGTTC GGTATCCGCG AAAAACTCAG CGGCACCATC
ACGTTGCGCG GCAAGCAAGT CAACAACCAT TCCGCCAATG AAGCCATCAA CAACGGTTTT
GCATTGGTGA CGGAAGAACG GCGTTCCACC GGGATTTATG CCTATCTGGA TGTCGGCTTT
AATTCGCTGA TTTCCAACAT CAACAAATAT AAAAACAGCA TTGGGCTGTT GGATAACTCC
CGCATGAAAA GCGACGTGCA GTGGGTTATC GATTCCATGC GGGTAAAAAC CCCAGGGCAC
CATACCCCTA TCGGTTCACT CTCCGGCGGC AACCAACAAA AAGTCATCAT CGGGCGTTGG
CTGCTGACCC AGCCGGAGAT CCTGATGCTC GACGAACCGA CCCGCGGTAT TGACGTGGGC
GCGAAATTCG AGATTTATCA GCTGATTGCC GAACTGGCTC GTAAAGGCAA AGGCATCATC
ATCATCTCGT CCGAAATGCC GGAACTGCTT GGCATTACCG ATCGAATTCT GGTGATGAGC
AACGGCCTGG TGTCAGGCAT TGTCGAAACC AAGAACACCA CGCAGAACGA AATTCTCCGT
TTAGCGTCGT TACACCTTTA A
 
Protein sequence
MTSDTLTTQR EFLLEMTNIS KSFPGVKALD NVNLKVRPHS IHALMGENGA GKSTLLKCLF 
GIYQKDTGSI QFQGQEIDFK SAKEALENGV SMVHQELNLV LQRSVMDNMW LGRYPKKGLF
VDQEKMYRDT KAIFDELDID IDPRDKVATL SVSQMQMIEI AKAFSYNAKI VIMDEPTSSL
TEKEVNHLFT IIRKLKDRGC GIVYISHKME EIFQLCDEIT VLRDGQWVAT QPLEGLNMDQ
IIAMMVGRSL TQRFPEKTNT PGDVMLEVRG LTSMRQPSIR DVSFDLRQGE ILGIAGLVGA
KRTDIVETLF GIREKLSGTI TLRGKQVNNH SANEAINNGF ALVTEERRST GIYAYLDVGF
NSLISNINKY KNSIGLLDNS RMKSDVQWVI DSMRVKTPGH HTPIGSLSGG NQQKVIIGRW
LLTQPEILML DEPTRGIDVG AKFEIYQLIA ELARKGKGII IISSEMPELL GITDRILVMS
NGLVSGIVET KNTTQNEILR LASLHL