Gene Dd703_0947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0947 
Symbol 
ID8090089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp1080140 
End bp1081393 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content55% 
IMG OID644835021 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionYP_002986576 
Protein GI242238395 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0680792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCAAAC TCAAGATAAC GAATGTGAAA ACCATTCTTA CCGCCCCCGG CGGTATTGAT 
TTGGCCGTGG TTAAGGTGGA AACCAACGAG CCCGGATTGT ATGGCCTGGG ATGCGCAACG
TTCACCCAGC GCATTTTTGC GGTCAAAAGC GCGATTGATG AATACATGGC GCCGTTTCTG
ATCGGAAAGG ATCCCACTCG TATCGAAGAT ATCTGGCAGT CTGCTGCGGT CAGCGGCTAC
TGGCGTAATG GCCCGATCAT GAACAATGCC CTTTCCGGCG TTGATATGGC GCTGTGGGAT
ATCAAAGGGA AGCTGGCCGG TATGCCGGTT TATGAACTGT TGGGCGGAAA ATGTCGGGAC
GGGATCCCCC TTTACTGCCA CACGGATGGC GGCGACGAGG TCGAGGTGGA AGACAATATT
CGTGCCCGCA TGGAGGAAGG GTATCAGTAC GTTCGCTGCC AGATGGGGAT GTACGGCGGG
GCTGGTACCG ATGATTTAAA ACTCATCGCC ACCCAACTGG CCAGAGCGAA GAATATTCAA
CCGAAACGCT CGCCGAGAAG CAAAACGCCG GGGATTTACT TTGACCCGGA AGCCTATGCG
AAGAGCGTTC CACGCCTGTT TGAGCATCTG CGCAATAAAC TGGGCTTCGG CATCGAATTT
ATCCATGACG TCCACGAGCG CGTCACGCCC GTCACCGCCA TCCAATTGGC GAAAACGCTG
GAACCTTACC AGCTCTTCTA TCTGGAAGAC CCCGTCGCAC CGGAAAATAT CGACTGGCTG
AGAATGCTGC GTCAGCAGTC TTCCACACCC ATTTCCATGG GGGAACTCTT CGTCAATATC
AATGAATGGA AGCCATTGAT TGATAACAAG CTGATTGACT ACATCCGCTG CCACGTCAGC
ACGATTGGCG GCATTACGCC GGCGAAAAAG CTGGCGGTGT ACAGCGAGCT GAACGGCGTC
CGCACCGCGT GGCACGGCCC GGGCGATATT TCACCGGTGG GCGTATGCGC CAACATGCAC
CTGGATATGA GCTCGCCTAA CTTCGGCATT CAGGAATATA CGCCGATGAA TGACGCACTG
CGCGAAGTCT TCCCGGGGTG TCCGGAGATC GATCAAGGCT ATGCCTACGT TAACGACAAA
CCGGGCTTAG GCATTGATAT CAATGAAACC CTGGCGGAGA AATACCCCTG TGACGGCGGC
ATTCCTTCCT GGACGATGGC GAGAACGCCT GACGGCACGG CATCCCGCCC CTGA
 
Protein sequence
MSKLKITNVK TILTAPGGID LAVVKVETNE PGLYGLGCAT FTQRIFAVKS AIDEYMAPFL 
IGKDPTRIED IWQSAAVSGY WRNGPIMNNA LSGVDMALWD IKGKLAGMPV YELLGGKCRD
GIPLYCHTDG GDEVEVEDNI RARMEEGYQY VRCQMGMYGG AGTDDLKLIA TQLARAKNIQ
PKRSPRSKTP GIYFDPEAYA KSVPRLFEHL RNKLGFGIEF IHDVHERVTP VTAIQLAKTL
EPYQLFYLED PVAPENIDWL RMLRQQSSTP ISMGELFVNI NEWKPLIDNK LIDYIRCHVS
TIGGITPAKK LAVYSELNGV RTAWHGPGDI SPVGVCANMH LDMSSPNFGI QEYTPMNDAL
REVFPGCPEI DQGYAYVNDK PGLGIDINET LAEKYPCDGG IPSWTMARTP DGTASRP