Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_0843 |
Symbol | |
ID | 8089979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 959375 |
End bp | 960715 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644834914 |
Product | glucarate dehydratase |
Protein accession | YP_002986475 |
Protein GI | 242238294 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTCAC AAAGTACCAC GCCTGTTATT ACCCGTATGC AGGTGATCCC GGTGGCCGGC CATGACAGCA TGTTGCTGAA CCTAAGCGGG GCGCATGCGC CGTATTTCAC CCGTAACATC GTGATTATGC AGGATAACGC GGGTAATACC GGCGTGGGTG AAATCCCTGG CGGCGAGAAA ATCCGTCAGA CGCTGGAAGA TGCCGCTCAG TTGGTCATCG GCAAAACGCT GGGTGAATAC AAGAATGTCA TGACCGCCGT GCGTAACCAG TTCGCCGATC GCGATGCCTC CGGTCGTGGC CTGCAGACGT TCGACCTGCG TACCACCATC CATGTCGTGA CCGGTATCGA AGCGGCCATG CTGGATTTGC TGGGCCAATT CCTGAATGTG CCGGTCGCCG CGCTGCTGGG CGATGGTCAA CAGCGCGATG CGGTGGAAAT GTTGGGCTAC CTGTTCTACA TCGGCGATCG CAATAAAACC GACCTGCCGT ATCAGAGCCA GCCGGATGAA AAATGCGACT GGTATCGTCT TCGCCATGAA GAAGCGTTGT CGCCGGAAAC GGTGGTGCGT CTGGCGGAAG CCGCTTATGA AAAATACGGT TTCAATGATT TCAAACTGAA GGGCGGCGTA CTGGCCGGCA GCGAAGAAGC GGAGGCGGTC ACGGCGCTGT CCAAACGTTT CCCGCAGGCA CGTATTACGC TGGATCCAAA CGGCGCCTGG TCGTTGGACG AAGCGATTCG TCTGGGCAAA CAACTGCGTG GCGTGCTGGC TTATGCCGAA GACCCGTGCG GCGCGGAGCA GGGTTTCTCC GGCCGTGAAG TGATGGCGGA ATTCCGTCGC GCCACCGGCC TGCCGACCGC GACCAATATG ATCGCTACCG ACTGGCGTCA GATGGGGCAC ACCATCTCCT TGCAGTCGGT GGATATCCCG CTGGCGGATC CGCATTTCTG GACCATGCAA GGCTCGGTGC GCGTTGCGCA GATGTGTCAT GAATGGGGTT TGACCTGGGG TTCGCATTCC AACAACCATT TCGACATTTC GCTGGCGATG TTCACCCATG TCGCGGCGGC GGCTCCGGGC CATATCACCG CCATCGACAC CCACTGGATC TGGCAGGAAG GCAACCAACG TCTGACCAAA GAACCGTTCC AGATCGTCGG CGGCATGGTG GAAGTGCCGA AAAAACCGGG TCTGGGCGTT GAATTGGATA TGGCGCAGGT GATGAAGGCC CATGAGTTGT ACAAAAACAT GGGGCTGGGG GCGCGCAACG ACGCCGTCGG CATGCAGTAT CTGGTTCCCG GCTGGACGTT CGATAACAAA CGCCCCTGTC TGGTTCGTTA A
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Protein sequence | MASQSTTPVI TRMQVIPVAG HDSMLLNLSG AHAPYFTRNI VIMQDNAGNT GVGEIPGGEK IRQTLEDAAQ LVIGKTLGEY KNVMTAVRNQ FADRDASGRG LQTFDLRTTI HVVTGIEAAM LDLLGQFLNV PVAALLGDGQ QRDAVEMLGY LFYIGDRNKT DLPYQSQPDE KCDWYRLRHE EALSPETVVR LAEAAYEKYG FNDFKLKGGV LAGSEEAEAV TALSKRFPQA RITLDPNGAW SLDEAIRLGK QLRGVLAYAE DPCGAEQGFS GREVMAEFRR ATGLPTATNM IATDWRQMGH TISLQSVDIP LADPHFWTMQ GSVRVAQMCH EWGLTWGSHS NNHFDISLAM FTHVAAAAPG HITAIDTHWI WQEGNQRLTK EPFQIVGGMV EVPKKPGLGV ELDMAQVMKA HELYKNMGLG ARNDAVGMQY LVPGWTFDNK RPCLVR
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