| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0711 |
|---|
| Symbol | |
|---|
| ID | 8089118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 801420 |
|---|
| End bp | 802730 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644834783 |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_002986344 |
|---|
| Protein GI | 242238163 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGTT ATAAGCACGC TCTGTTTTCT TCATTCATCA TGCTGGGCGC CCTTGCCAGC
AGCAGTGTCA TGGCGGCAAA AACACAGATC ACTTTCTTAT ATAGCGACGA CGATCCGGAA
CTGGTTCATT TCATGGAACA GAAAGTGAAA TCGTTCTCGC AAAATAACGA TCATATCGAC
GTGAATTTCG TCAGCACCGG CTACAACGCG CTGCAAACCC AGTTGCCGAT GCAATTAGCC
GCCGGGCTGG GGCCGGATAT CGCCAAAACC ACTCAAATGG GGTTGCTCTC CTACACACTG
GATTTACGTC CCTATTTGTC TGACCCGGCC AGCTTTGAAA AACGCTATGG CGCCAGCATT
GAGAAAATCA TGCGGGTGAA AGGGGTACAC AAAGACAACG CGCTGCCGGG GTTCGTCGCG
TCCTGGACTG CCGACCTGCC GTTTATCAAT ATCACACTGT TCCAGCAGGC CGGCGTACCG
GTGCCGCAGG CGGGCTATAC CATGGAACAG CTGATGGCGG CCTCGAAGCA AGTGGCGGAG
AAAACCGGCG TCGCGATCCC GTTCACCATC GACCGCAGCG GTTTTCGTTT CTCCGGCCCG
GCTTATTCCT ACGGCACTCG CTATGAAAAA GACGGCAAAA TCACCTTCCC GGACGCCGCC
GCGCAAGCCT GGATCAAGGA TCTGAAACGT TGGTCGGATG AAGGCATTTT CCCGCGTGAG
ATGTGGGGCG CCGCCGGCGG TGGGCAGTAC AAGAGCATGG CGGACGACTT CGTCAACGGC
AACATCGTCA CCTACTTCTC CGGCAACTGG CAGTTGAACC AGTTCAGCAA ACAGATCGGT
AACGGCTTCG ACTGGAAGAT GCTGCCGGCG CCTTGCAAGG AAAAATGCAT TTCCATGGGC
GGCGCCACCT TCATCATGCC GTTCAAGACC AGCAAACACC CGAAAGAAGT GGCCGAATTC
ATGGAATGGC TGGGCAGCGA TGCCATCCAA CGTGAAATCG CCGAACACTT TAATATCATC
GTCGGTGCCG ACATCCCCAA CCTGAACTAT CAGACCAAAG ATCAACACGT TATCGATGGG
TTGAACACCG CTCGCACCGA AATCGCCAAG ATTCCGGCCT ACGTCTTCGA CTGGGAGAAA
ATGGAAAGTC TGGGCGGCAA CGAGCTGTAC CCGATTATCC TGACCCGCTT TACCCAATAC
CTGAACAATC AAGTGTCGTT CGACGAGTAC CTGCGCCTAA CCGAAAACGA CGTCAAACGC
CTGAACGAGA CGATTGCCGC CAACCGTCAG CAGCAGCAGA AAAAGTCATA A
|
|---|
| Protein sequence | MNRYKHALFS SFIMLGALAS SSVMAAKTQI TFLYSDDDPE LVHFMEQKVK SFSQNNDHID
VNFVSTGYNA LQTQLPMQLA AGLGPDIAKT TQMGLLSYTL DLRPYLSDPA SFEKRYGASI
EKIMRVKGVH KDNALPGFVA SWTADLPFIN ITLFQQAGVP VPQAGYTMEQ LMAASKQVAE
KTGVAIPFTI DRSGFRFSGP AYSYGTRYEK DGKITFPDAA AQAWIKDLKR WSDEGIFPRE
MWGAAGGGQY KSMADDFVNG NIVTYFSGNW QLNQFSKQIG NGFDWKMLPA PCKEKCISMG
GATFIMPFKT SKHPKEVAEF MEWLGSDAIQ REIAEHFNII VGADIPNLNY QTKDQHVIDG
LNTARTEIAK IPAYVFDWEK MESLGGNELY PIILTRFTQY LNNQVSFDEY LRLTENDVKR
LNETIAANRQ QQQKKS
|
|---|
| |