| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0646 |
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| Symbol | murD |
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| ID | 8089053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 729004 |
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| End bp | 730317 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644834718 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_002986279 |
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| Protein GI | 242238098 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.787701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTATC AGGGTAAACA GGTTGTCATT ATCGGGTTAG GGCTGACAGG GCTCTCCTGT
GTTGATTTCT TCCTTTCACG CGGCGTAGTG CCTCGCGTGA TGGATACCCG TGTCAGTCCG
CCGGGGTTGG ACAAACTGCC CGGCCATATT GAGCGTTATC TCGGCGGCCT GAATGAAACA
TGGCTGATGG AAGCCGACCT GATTGTAGCA AGCCCAGGTA TTGCGTTGTC GACCCCGGTC
TTGTGCGATG CCGCTGAGGC CGGCGTGGAA ATTGTGGGCG ACATCGAGTT GTTCTGCCGT
GAAGCGCAGG CGCCGATCGT GGCGATTACC GGTTCGAACG GTAAAAGCAC GGTGACGACG
CTGGTGGGCG AGATGGCTCG CGCCGCCGGA TGGGCGGTCG GCGTCGGCGG CAATATCGGC
TTACCGGCGC TGGCGCTGTT GAAGCAGGAA AGCCAGCTGT ATGTGCTGGA GCTTTCCAGC
TTCCAACTGG AAACCACCCG CAGCCTCCAT GCAGCGGCGG CGACCATTCT TAATGTGACC
GAAGATCATA CCAACCGTTA TCCGCTGGGA TTGCAGCAAT ATCGCGCCGC CAAGTTGCGT
ATTTACGAGC ATGCCAACGT TTGCATCGTC AATGCCGATG ATGCGTTGAC TATGCCGATT
CGCGGCGCGG ATCCCCGCTG CCTGAGCTTT GGCGTCGACG TGGGGGATTA TCATCTCAAC
CGTCAGCAGG GTGAAGTCTG GCTGCGCGTG AAAGGCGAAC GGGTGTTGAA TACCCGCGAA
ATCAAACTGA CGGGGCAGCA TAACTACACC AACGCGCTGG CGGCACTGGC GCTGGCGGAT
GCGGTCGGCA TTCCCCGCGC TTCGGCGCTG ACGGCGCTGA CAACCTTCAC CGGCCTGCCG
CACCGCTTCC AGCTGGTGAT GGACGGCAAG GGCGTTCGTT GGGTGAATGA TTCCAAGGCC
ACCAATGTGG GCAGTACGGA AGCGGCGCTT AACGGCCTGC ATCTGGATGG CACATTGCAC
CTGCTGCTGG GGGGCGATGG CAAATCGGCG GATTTCTCGC CGTTGCAGCA CTACCTGCAG
GGCGACCGGA TCCGTCTGTA CTGTTTTGGC CGTGACGGCG CGCAACTGGC GGCACTGCGG
CCGGAGATCG CCGATCAAAC GGAAACCATG GAACAGGCGA TGCGGTTGAT TGCCGGGCGG
GTTCGCTCCG GCGATATGGT GCTGTTATCG CCGGCCTGCG CCAGCCTGGA TCAGTTTCGT
AGTTTCGAAC ATCGGGGCGA TGAATTCGCC CGTCTGGCGA GGGAGTTGGG ATAA
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| Protein sequence | MDYQGKQVVI IGLGLTGLSC VDFFLSRGVV PRVMDTRVSP PGLDKLPGHI ERYLGGLNET
WLMEADLIVA SPGIALSTPV LCDAAEAGVE IVGDIELFCR EAQAPIVAIT GSNGKSTVTT
LVGEMARAAG WAVGVGGNIG LPALALLKQE SQLYVLELSS FQLETTRSLH AAAATILNVT
EDHTNRYPLG LQQYRAAKLR IYEHANVCIV NADDALTMPI RGADPRCLSF GVDVGDYHLN
RQQGEVWLRV KGERVLNTRE IKLTGQHNYT NALAALALAD AVGIPRASAL TALTTFTGLP
HRFQLVMDGK GVRWVNDSKA TNVGSTEAAL NGLHLDGTLH LLLGGDGKSA DFSPLQHYLQ
GDRIRLYCFG RDGAQLAALR PEIADQTETM EQAMRLIAGR VRSGDMVLLS PACASLDQFR
SFEHRGDEFA RLARELG
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