Gene Dd703_0630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0630 
Symbol 
ID8089037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp710148 
End bp711548 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content60% 
IMG OID644834702 
Product3-isopropylmalate dehydratase, large subunit 
Protein accessionYP_002986263 
Protein GI242238082 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0065] 3-isopropylmalate dehydratase large subunit 
TIGRFAM ID[TIGR00170] 3-isopropylmalate dehydratase, large subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAGA CCTTATATCA GAAACTGTTT GAAGCACATG TGGTTCACGA AGCGCCGAAT 
GAAACGCCGC TGCTGTATAT CGACAGGCAT CTGGTGCACG AAGTCACATC GCCGCAGGCG
TTCGACGGCC TGCGCGCCAT GGGGCGTAAC GTTCGCCAGC CGGGCAAAAC CTTCGCCACC
ATGGATCACA ACGTCTCGAC CCAGACGCGC GACATCAACG CCAGCGGCGA AATGGCCCGT
ATTCAAATGC AGGAACTGAT CAAGAACTGC GCTGAATTCG GCGTCCAACT GTATGACTTG
AATCATCCGT TTCAGGGCAT CGTGCATGTG ATCGGGCCGG AACAGGGCAT GACCCTGCCG
GGTATGACCA TCGTCTGCGG CGACTCCCAC ACCGCCACCC ACGGCGCTTT CGGCGCACTG
GCATTTGGTA TCGGTACTTC CGAAGTCGAA CATGTGCTAG CGACGCAGAC CCTGAAACAG
GGCCGCGCCA AAACCATGAA AATCGAAGTC ACCGGCGACG CCGCTCCCGG CATCACCGCC
AAAGACATCG TACTGGCGAT CATCGGCAAA ACCGGTAGCG CAGGCGGTAC TGGCTATGTT
GTGGAATTCT GCGGCAAGGC GATTGAAGCG CTGAGCATGG AAGGCCGTAT GACCCTGTGC
AACATGGCGA TAGAAATGGG CGCCAAGGCC GGCCTGGTCG CGCCGGATGA AACTACCTTC
GCCTATCTGA AGGGCCGCCA GTTCGCGCCG AAGGACAGTA ACTGGGATGA CGCCGTCGCC
TATTGGACAT CGCTGAAATC CGATGCCGAC GCGGTCTTTG ATGCGGTTGT CACCCTGAGC
GCCGCCGATA TCGCGCCGCA AGTCACCTGG GGCACCAACC CCGGCCAGGT AATTGCCGTC
AACCAGCAGA TTCCGGCGCC GGAGTCCTTC AACGATCCGG TGGAACGCGC ATCCGCAGCC
AAAGCGCTGG CCTACATGGG CCTGGAGGCA GGTGTAAAAC TGACCGATGT CGCCATCGAC
AAGGTGTTCA TCGGTTCCTG CACCAACTCC CGAATTGAAG ATCTGCGGGC GGCGGCGGCT
ATCGCTAAAG GCCGCAAAGT CGCCGCCGGC GTACAAGCCT ACGTGGTGCC GGGATCCGGC
CCGGTCAAAG CACAGGCGGA GGAGGAAGGT CTGGACAAGA TCTTTATCGA AGCCGGTTTC
GAATGGCGTC TGCCCGGCTG CTCCATGTGT CTGGCCATGA ACAACGACCG GTTGAACCCG
GGCGAGCGTT GCGCCTCCAC CAGCAACCGC AACTTCGAAG GACGTCAGGG CCGTGGCGGC
CGCACCCATC TGCTCAGCCC GGCGATGGCC GCGGCGGCGG CGGTAACGGG CCGTTTCGCT
GATATCCGTG AACTGAATTA A
 
Protein sequence
MSKTLYQKLF EAHVVHEAPN ETPLLYIDRH LVHEVTSPQA FDGLRAMGRN VRQPGKTFAT 
MDHNVSTQTR DINASGEMAR IQMQELIKNC AEFGVQLYDL NHPFQGIVHV IGPEQGMTLP
GMTIVCGDSH TATHGAFGAL AFGIGTSEVE HVLATQTLKQ GRAKTMKIEV TGDAAPGITA
KDIVLAIIGK TGSAGGTGYV VEFCGKAIEA LSMEGRMTLC NMAIEMGAKA GLVAPDETTF
AYLKGRQFAP KDSNWDDAVA YWTSLKSDAD AVFDAVVTLS AADIAPQVTW GTNPGQVIAV
NQQIPAPESF NDPVERASAA KALAYMGLEA GVKLTDVAID KVFIGSCTNS RIEDLRAAAA
IAKGRKVAAG VQAYVVPGSG PVKAQAEEEG LDKIFIEAGF EWRLPGCSMC LAMNNDRLNP
GERCASTSNR NFEGRQGRGG RTHLLSPAMA AAAAVTGRFA DIRELN