| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0623 |
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| Symbol | tbpA |
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| ID | 8089030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | - |
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| Start bp | 703428 |
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| End bp | 704411 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644834695 |
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| Product | thiamine transporter substrate binding subunit |
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| Protein accession | YP_002986256 |
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| Protein GI | 242238075 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4143] ABC-type thiamine transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily
[TIGR01276] thiamine ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.716542 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTAAAAA AATTACTGTC CTGCCTGCTA TTGCTATCCG CCCCCGTGTT CGCCAAACCG
ACGCTCACGG TCTACACCTA CGACTCATTC GCGTCAGAAT GGGGGCCGGG GCCGGGCGTC
AAAACCGCCT TTGAAAAAAC CTGCGACTGC GAACTGAAAT TCGTCGCGCT GGAAGATGGC
GTCTCACTGC TTAACCGCCT GCGCATGGAA GGCAAAAACA GCCCGGCCGA TATCGTCTTG
GGTCTGGACA ACAACCTGCT GCAGGCGGCG GAACAAACCG GCCTGTTCAG CAAACACGGT
ATTAGCACCG ATGCGCTGGC CGTACCCGGC GGTTGGAAAA ACGACACCTT TCTGCCGTTC
GACTACGGTT ACTTCGCCTT CGTCTACAAC AAAGATAAGC TGAAAAACCC GCCGACAAGC
CTGCGTGAAC TGGTGGAAAG CAACCAGCCG TGGAAGGTGA TTTACGAAGA CCCGCGCACC
AGCACGCCGG GTTTGGGCTT GCTGCTGTGG ATGCAAAAAG TGTACGGCGA CCAGACGCCG
CAGGCCTGGC AGCAACTGGC GAAAAAAACC GTTACCGTCA CCAAAGGATG GAGCGAAGCT
TACGGTCTAT TCCTCAAAGG CGAGGCGGAT CTGGTACTGA GCTACACCAC TTCGCCGGCC
TATCACATCA TCGCCGAGAA GAAAGACAAC TATGCCGCCG CTGATTTCGC CGAAGGCCAT
TACCTGCAAG TGGAAGTGGC CGGTCGTCTG GCTGGCAGTA AAAACCCCCA GTTGGCGGAG
CGTTTCCTGC AGTTCATGGT CAGCCCGGCT TTCCAGCAGA TCATCCCGAC CACCAACTGG
ATGTACCCGG CGGTTAAAAC CGAGTTGCCT GCGGGCTATA ACAGCCTGAT GGTGCCCAAG
ACCTCGTTGT CGTTCACCCC GCAGCAGGTC GCCGAGCAAC GCGCAAGCTG GGTGCAGGCA
TGGCAACGCG CCGTCAGCCG CTGA
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| Protein sequence | MLKKLLSCLL LLSAPVFAKP TLTVYTYDSF ASEWGPGPGV KTAFEKTCDC ELKFVALEDG
VSLLNRLRME GKNSPADIVL GLDNNLLQAA EQTGLFSKHG ISTDALAVPG GWKNDTFLPF
DYGYFAFVYN KDKLKNPPTS LRELVESNQP WKVIYEDPRT STPGLGLLLW MQKVYGDQTP
QAWQQLAKKT VTVTKGWSEA YGLFLKGEAD LVLSYTTSPA YHIIAEKKDN YAAADFAEGH
YLQVEVAGRL AGSKNPQLAE RFLQFMVSPA FQQIIPTTNW MYPAVKTELP AGYNSLMVPK
TSLSFTPQQV AEQRASWVQA WQRAVSR
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