Gene Dd703_0583 details

Gene Information

• Locus tag: Dd703_0583
• Symbol: nhaA
• ID: 8088990
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: +
• Start bp: 656623
• End bp: 657801
• Gene Length: 1179 bp
• Protein Length: 392 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 644834655
• Product: pH-dependent sodium/proton antiporter
• Protein accession: YP_002986216
• Protein GI: 242238035
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3004] Na+/H+ antiporter
• TIGRFAM ID: [TIGR00773] Na+/H+ antiporter NhaA

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0187832
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGGAG TGTTCAGGCG TTTCATCCAT CTGGAGGCCG CGGCCGGTAT TATCCTGATT 
GTGGCAACAC TACTGGCGCT ATTCATCGCC AACCTGCCGG CTACGGTTTC CCTGTACCAT 
GCGTTTTTGG CGATCCCGGT TTCATTACGT ATTGCGGCAT TGGAGATCGA TAAGCCGTTG 
CTGTTGTGGA TCAACGATGG CTTGATGGCG ATTTTTTTTC TGCTGGTGGG GTTGGAGGTT 
AAGCGCGAAC TGTTATCCGG CTCTTTGGCC AGCAGGCGCC AGGCGTTGCT TCCTATTGCT 
GCGGCAGTCG GCGGGATGTT GGTGCCTGCG CTCTTGTTTC TGGTGTTTAA CTTTCAGGAC 
GCAACAACCC GTTCCGGGTG GGCGATTCCT GCTGCGACGG ACATCGCCTT TGCGGTCGGT 
ATTCTGGCGT TATTGGGAAA ACGTGTCCCT GTTGGTTTGA AAGTGTTTCT GCTGGCGCTG 
GCCATTATTG ATGATTTGGG CGCCATTCTG ATTATTGCGC TGTTCTATAC TCAACAGCTT 
TACTGGCCTG CGCTGGTTTG TGCCCTGGCA GCGATACTGG TGCTTGTTTA CCTACACCAT 
CAACAAGTGA TGAAAACATC GCTTTACCTG TTGATCGGGA TCATCTTGTG GGTGTGTGTG 
TTGAAATCGG GCATACATGC CACGCTGGCT GGTGTGATCG TCGGTTTTTT CATTCCTTTG 
CGTTCGCCAA CCGGGGGGGT ATCTCCTGCT AAAACGTTGG AACATGGACT GGAGGTGTGG 
GTTTCAATGA TGGTAATACC CGTTTTCGCT TTTGCTAATG CGGGCATTGA GCTGAAGGGG 
ATTGCGTTGT CGCAACTGGC CGCGCCACTT ACATGGGGGA TCGGCGCCGG GTTGTTGTTG 
GGCAAGCCAT TGGGGATCAC GTTGTTCAGT TGGCTGGTGA TTCGCACCAG GCTAGCGGTG 
CTTCCATCTG GCGTCGATTT TCGCCAGGTT ATGGCAGTAT CCTTGTTGTG TGGCATTGGT 
TTTACCATGT CGATATTTAT TACATTGCTG GCATTTGGCG AGGTGAATGG CGACGTTATT 
CTGTATGCCA AGCTGGCGAT TCTGCTGACG TCTTTTGCCG CAGCCGTTCT GGGATTTCTG 
GCATTGCGTG CGGTGTTGCC GGCGGCGCAG TGGCAATAA 

 

Protein sequence

MIGVFRRFIH LEAAAGIILI VATLLALFIA NLPATVSLYH AFLAIPVSLR IAALEIDKPL 
LLWINDGLMA IFFLLVGLEV KRELLSGSLA SRRQALLPIA AAVGGMLVPA LLFLVFNFQD 
ATTRSGWAIP AATDIAFAVG ILALLGKRVP VGLKVFLLAL AIIDDLGAIL IIALFYTQQL 
YWPALVCALA AILVLVYLHH QQVMKTSLYL LIGIILWVCV LKSGIHATLA GVIVGFFIPL 
RSPTGGVSPA KTLEHGLEVW VSMMVIPVFA FANAGIELKG IALSQLAAPL TWGIGAGLLL 
GKPLGITLFS WLVIRTRLAV LPSGVDFRQV MAVSLLCGIG FTMSIFITLL AFGEVNGDVI 
LYAKLAILLT SFAAAVLGFL ALRAVLPAAQ WQ