Gene Dd703_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0562 
Symbol 
ID8088969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp629861 
End bp631573 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content50% 
IMG OID644834634 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_002986195 
Protein GI242238014 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00821394 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAAC AAAAAAGAAA AATTTCTTCG GTAAACAATG TTCGTCTGGT GACGTTTTTC 
ATTACGTTGT TGACGATCAT TCTGTTGTTG TTTGCACTTT CTATCGGCAC CGCGAGCTAC
TTTTTGAAAC AGAGTAACGA TGCGTTAGAT ATGGCTAATC AGGCATCGGA TACGCGCTCG
GGAATTAGCA GCAGTATGGA TCAACTGCGT GTCGCTCGTC AGTTGCTGGT TCAGGCGGTA
GCTGCGTCGC GAATTGGTGA TAAAGATTCA TATAATCAGT CATTTAAAGA AGCTAACGAT
CGAATCAATA GTTCCAAAAA ACGGTTCGAC GAATATATGG CCCGTGTCGA TCAGTCTTCG
GAAGAAAAGG CGCTAGATAG CGAATTGACG GCCAGTTACA ACGCTTACCG TAATAACGTA
CTGTTGCCTA TGGTGGAGAT GGTGCGCGGT GGTGAGTTCG AGAGCGTTAT CGAGCTAGAG
ACAACATTAG CGCGGCAGTT GGACAATAAC TATGCGCTTC CTGTTCGTAA GGAGGTGAAG
TATCTGAGCG AGTATGCGAG CCGGATCAAT ACCGAGGCGG AAAGAAAGTC CAATCTGGGA
TACACCCTGA TGGGAACGGC ATTTGTGTTG TCGATCGTGT TAGCTGTGCT CAGCTATTTT
ATCATTCGCA GAGCAGTCCT GATGCCGGTG GATATTCTGA TTGCTCGCAT TCAGAACATT
GCCGGGGGGG ATTTGACTCA GCCGCCTGTC GATTTGGGAC GTAATGAAAT AGGCATTCTT
GGTAAGAATC TTCAACAGAT GCAGGATTCG CTGACGAATA CCGTTTCAAT CGTGCGTGAT
GGTGCTGATT CTATTTATCA GGGCGCGTCC GAGATTAGTG TGGGTAACGT CGATCTGTCT
TCTCGTACTG AACAGCAAGC GGCGGCTCTT GAGCAGACGG CTGCCAGCAT GGAAGAGTTG
ACTTCTACCG TGAAACAGAA CTCCGACAAC GCCAGTCACG CCAGTCAACT GGCCCGTAAT
GCTTCCACCA AAGCAGAGCA GGGCGGCAAT ATTGTGAAGG AAGTCGTTAC CACCATGAGC
AATATTTCTG CCAGCTCCAG AAAAATTTCA GAAATTACCA GTGTTATCAA TAGTATTGCA
TTCCAAACCA ATATTCTGGC GTTGAATGCA GCTGTTGAGG CGGCGCGGGC AGGCGAACAA
GGGCGTGGTT TTGCCGTCGT GGCCGGTGAG GTACGAAACC TGGCTCAGCG AAGCGCTCAG
GCAGCGAAAG AAATAGAGTC CCTTATTGGT GAGTCGGGAC GTTTGGTTGA TTCCGGCTCG
GAGCTGGTAA GTCGGGCGGG CGCAACGATG GATGAGATCG TGAATGCTGT CGTCAGCGTG
ACGGATATTA TGGGGGAAAT CGCATCCGCC TCCGATGAGC AACGCCGCGG CATTGAGCAG
GTCAATCAGG CGGTTGTCGA AATGGAGGGA TCAACCCAGC AAAATGCGGC CCTGGTACAA
GAGGCTTCCT CTGCTGCTGC ATCTTTGGAG TCTCAGGCAG AGCGGCTGAC TCAGGCTGTC
TCTGTATTCA AACTGCGTTC TTATACTGAC AAAGCCCCCC TCGCTGTCGT GGCACCACGT
CAAAATCAGC CGCTGGTGCC GGCAACGGCG ACCGCAGCGA TAGGCAATGG GAAGAAAAAG
CCTGGCGACG ATCAGAACTG GACGGTTTTT TAA
 
Protein sequence
MAEQKRKISS VNNVRLVTFF ITLLTIILLL FALSIGTASY FLKQSNDALD MANQASDTRS 
GISSSMDQLR VARQLLVQAV AASRIGDKDS YNQSFKEAND RINSSKKRFD EYMARVDQSS
EEKALDSELT ASYNAYRNNV LLPMVEMVRG GEFESVIELE TTLARQLDNN YALPVRKEVK
YLSEYASRIN TEAERKSNLG YTLMGTAFVL SIVLAVLSYF IIRRAVLMPV DILIARIQNI
AGGDLTQPPV DLGRNEIGIL GKNLQQMQDS LTNTVSIVRD GADSIYQGAS EISVGNVDLS
SRTEQQAAAL EQTAASMEEL TSTVKQNSDN ASHASQLARN ASTKAEQGGN IVKEVVTTMS
NISASSRKIS EITSVINSIA FQTNILALNA AVEAARAGEQ GRGFAVVAGE VRNLAQRSAQ
AAKEIESLIG ESGRLVDSGS ELVSRAGATM DEIVNAVVSV TDIMGEIASA SDEQRRGIEQ
VNQAVVEMEG STQQNAALVQ EASSAAASLE SQAERLTQAV SVFKLRSYTD KAPLAVVAPR
QNQPLVPATA TAAIGNGKKK PGDDQNWTVF