Gene Dd703_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0560 
Symbol 
ID8088967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp627129 
End bp627791 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content54% 
IMG OID644834632 
Productribose 5-phosphate isomerase 
Protein accessionYP_002986193 
Protein GI242238012 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAGG ATGAACTGAA AAAGGCCGTT GGTTGGGCCG CACTGGATTA TGTCCGGCCC 
GGGACGGTTG TTGGCGTAGG TACGGGGTCT ACCGCCGCAC ACTTTATTGA CGCATTGGGT
ACGATCAAGG ATCAGATTAA AGGCGCTGTA TCCAGCTCTG ATGCGTCGAC TGCCAAACTG
AAAAGTCTGG GTATCCCGGT CTTTGATTGT AATGATGTCG ATGCGCTGGA TGTTTACGTC
GATGGCGCCG ATGAAATTAA TTCCCACATG CAGATGATCA AAGGCGGCGG TGCGGCGTTG
ACGCGCGAGA AAATTGTCGC AGCCATTTCC CGTCAATTTG TGTGCATAGT GGATGCCTCA
AAGCAGGTTG AGGTGCTGGG TAAGTTCCCG TTGCCGGTGG AAGTCATTCC AATGGCTCGC
ACTTATGTCA CCCGCGAGCT GACTAAACTG GGCGGTCGCC CGGTGTACCG TGACGGCGTG
TTGACGGATA ACGGCAACAT TATCCTGGAC GTGCATGACT TTGATTTATC CGATGCGGTG
GCTATGGAGA ATCGCATCAA TGGTATTGCT GGCGTGGTGA CTGTCGGGCT GTTTGCCAAC
CGAGGCGCTG ATGTGGCGCT GGTCGGAACG GCCGATGGCG TCAAAACCGT TCGGTTGAAG
TAA
 
Protein sequence
MTQDELKKAV GWAALDYVRP GTVVGVGTGS TAAHFIDALG TIKDQIKGAV SSSDASTAKL 
KSLGIPVFDC NDVDALDVYV DGADEINSHM QMIKGGGAAL TREKIVAAIS RQFVCIVDAS
KQVEVLGKFP LPVEVIPMAR TYVTRELTKL GGRPVYRDGV LTDNGNIILD VHDFDLSDAV
AMENRINGIA GVVTVGLFAN RGADVALVGT ADGVKTVRLK