Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_0560 |
Symbol | |
ID | 8088967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 627129 |
End bp | 627791 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644834632 |
Product | ribose 5-phosphate isomerase |
Protein accession | YP_002986193 |
Protein GI | 242238012 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0120] Ribose 5-phosphate isomerase |
TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCAGG ATGAACTGAA AAAGGCCGTT GGTTGGGCCG CACTGGATTA TGTCCGGCCC GGGACGGTTG TTGGCGTAGG TACGGGGTCT ACCGCCGCAC ACTTTATTGA CGCATTGGGT ACGATCAAGG ATCAGATTAA AGGCGCTGTA TCCAGCTCTG ATGCGTCGAC TGCCAAACTG AAAAGTCTGG GTATCCCGGT CTTTGATTGT AATGATGTCG ATGCGCTGGA TGTTTACGTC GATGGCGCCG ATGAAATTAA TTCCCACATG CAGATGATCA AAGGCGGCGG TGCGGCGTTG ACGCGCGAGA AAATTGTCGC AGCCATTTCC CGTCAATTTG TGTGCATAGT GGATGCCTCA AAGCAGGTTG AGGTGCTGGG TAAGTTCCCG TTGCCGGTGG AAGTCATTCC AATGGCTCGC ACTTATGTCA CCCGCGAGCT GACTAAACTG GGCGGTCGCC CGGTGTACCG TGACGGCGTG TTGACGGATA ACGGCAACAT TATCCTGGAC GTGCATGACT TTGATTTATC CGATGCGGTG GCTATGGAGA ATCGCATCAA TGGTATTGCT GGCGTGGTGA CTGTCGGGCT GTTTGCCAAC CGAGGCGCTG ATGTGGCGCT GGTCGGAACG GCCGATGGCG TCAAAACCGT TCGGTTGAAG TAA
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Protein sequence | MTQDELKKAV GWAALDYVRP GTVVGVGTGS TAAHFIDALG TIKDQIKGAV SSSDASTAKL KSLGIPVFDC NDVDALDVYV DGADEINSHM QMIKGGGAAL TREKIVAAIS RQFVCIVDAS KQVEVLGKFP LPVEVIPMAR TYVTRELTKL GGRPVYRDGV LTDNGNIILD VHDFDLSDAV AMENRINGIA GVVTVGLFAN RGADVALVGT ADGVKTVRLK
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