| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0535 |
|---|
| Symbol | hfq |
|---|
| ID | 8088861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 598703 |
|---|
| End bp | 599002 |
|---|
| Gene Length | 300 bp |
|---|
| Protein Length | 99 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644834607 |
|---|
| Product | RNA-binding protein Hfq |
|---|
| Protein accession | YP_002986168 |
|---|
| Protein GI | 242237987 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1923] Uncharacterized host factor I protein |
|---|
| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000282638 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAGG GGCAATCTTT GCAAGATCCG TTCTTGAACG CACTGCGTCG CGAACGTGTT
CCGGTTTCGA TTTATCTGGT CAACGGCATC AAGTTGCAGG GGCAGATTGA ATCTTTCGAT
CAGTTTGTAA TTCTGCTGAA GAATACGGTT AGTCAAATGG TATACAAGCA TGCCATTTCC
ACGGTGGTTC CGTCTCGCCC GGTATCGCAT CACAGCAATA ATCCTGGCAC CAATAACTAT
CATGGTAATA ATCAGGCCGC TCAGCAGCAG CCGCAACAGG ATAGTGATGA CGCCGAATAA
|
|---|
| Protein sequence | MAKGQSLQDP FLNALRRERV PVSIYLVNGI KLQGQIESFD QFVILLKNTV SQMVYKHAIS
TVVPSRPVSH HSNNPGTNNY HGNNQAAQQQ PQQDSDDAE
|
|---|
| |