Gene Dd703_0532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0532 
Symbol 
ID8088858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp594036 
End bp595727 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content58% 
IMG OID644834604 
Productcell wall hydrolase/autolysin 
Protein accessionYP_002986165 
Protein GI242237984 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00749255 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGCGT TGCTGGGCGG GTTATTACTG CTGGCATGGC CGCTTTGGGC GGCGACTCTC 
ACCGATATTC GCGTAAATAA TGCCTCGACG GAAGCTGTGG TGACGTTGAG TTTCAGCGGG
CCGCCGGTGT ATGAATTTTC TTCCCTGAGT AACCCGAACC GGGTGGTGAT CGATATCAGC
CAATCCGGCA TGGTTCAGGG GCTGCCGCTG GAGTTTAACG GCCAGAATAT TATCTCCAGA
ATTCGCTCCA GTAAGGCCAG GGAGCCTGGC AACCTGCGGT TGGTGCTTGA TCTGACGCAG
AAAGCGCAGA CCCGAGCGCA AAAGGAGAAA AGCGGCGGCG GTTATAACGT GGTGCTGAAT
GTGATGGGCG AACGTAAACC GGTAGCCAAA CCACCGGTAT CCACCTCCTC CCGTAGCGCT
GTCACCACCG GGCGCAATCC GCTTACCGGC AAGACGGCAG ATGTTTCTTC GTCGCGTGTT
GCCGTAGAGC CGGTGAAAGC CTCCGCTCGC GGTGGGCGCG GAGAGCGGGT TACTGTGGCG
ATTGATGCGG GTCACGGCGG GCAGGATCCT GGTGCTACCG GGCCCAACGG CCTGTATGAA
AAAACGGTGA CTATTGCGAT TGCCCGCAAA CTCAAGGCGC TGATGAGTAG CGATCCGGAC
TTTAAACCGG TGCTGACCCG CGATGGGGAT TATTTTATCT CGGTGATGGG GCGCTCTGAA
GTTGCCCGCA AGCAAGGGGC CAATCTGCTG GTGTCCATCC ATGCGGATGC GGCTCCCAAC
CGCGGCGCGA CGGGCGCATC GGTGTGGGTA TTGTCCAACC GGCGCGCCAA CAGCGAGATG
GCGAACTGGC TTGAACAACA TGAGAAGCAA TCCGAATTGC TGGGTGGCGC AGGGGATCTG
CTGGCGAACA GCGCTGCCGA TCCCTACCTG AGCCAGGCGG TGCTGGATTT GCAGTTCGGC
CATTCTCAGC GTGTGGGTTA TGACGTAGCG GTGAAAGTGC TGCGTGAGTT GCAGCGCGTC
GGCAGTTTGC ATAAACGGCG GCCGGAACAT GCCAGTCTTG GCGTGCTGCG TTCTCCAGAT
ATTCCTTCAC TGTTGGTGGA AACCGGCTTT ATTTCCAATC CGAGCGAGGA GCGGCTGCTG
GGGAGCAGTG AGTATCAGGA AAAGATTGCC AATGCCATTT ATCAGGGACT GCGCAGTTAT
TTCCAGTCTC ATCCGTTGCA AAATGTCCCA AAGCAGGAAA ACCGGCCGCA AAAGCAGGAA
AACCGGCCGC AAGCGTCGTC GGTGGTTAAC GCCCCCGCGT CTGCGCCGGT AAAGTCGGCA
ACGCCTGCCG TGAGGAATGA CGCGGTGACT CAGCGTCATA CGGTGGCGCG CGGCGAAACC
TTGTCCGGCA TCGCTGCGCA GTATGGCGTC AGCATGTCCA CCCTTCGTGA CCTCAACAGC
CTGAAAAACG ATGTGGTGTG GGTTGGACAA CGGCTGAAAA TTCCTGGTAA GGCCTCGACG
CCAGGCGTCA CGAAAACGCC TCCCGCACCC AAAAAAAGCA CCGTGGTGAT TAAACATAAA
GTGATGCGCG GCGATACGCT CAGCGCCATT GCGGTTCGTT ATGGCGTGAG CATGAAAGAG
ATCCAACAGG TGAATAATAT GACTTCCGGC ACTGTACAAC TCGGGCAGAC GTTGGTCATA
CCCTCCACGT GA
 
Protein sequence
MKALLGGLLL LAWPLWAATL TDIRVNNAST EAVVTLSFSG PPVYEFSSLS NPNRVVIDIS 
QSGMVQGLPL EFNGQNIISR IRSSKAREPG NLRLVLDLTQ KAQTRAQKEK SGGGYNVVLN
VMGERKPVAK PPVSTSSRSA VTTGRNPLTG KTADVSSSRV AVEPVKASAR GGRGERVTVA
IDAGHGGQDP GATGPNGLYE KTVTIAIARK LKALMSSDPD FKPVLTRDGD YFISVMGRSE
VARKQGANLL VSIHADAAPN RGATGASVWV LSNRRANSEM ANWLEQHEKQ SELLGGAGDL
LANSAADPYL SQAVLDLQFG HSQRVGYDVA VKVLRELQRV GSLHKRRPEH ASLGVLRSPD
IPSLLVETGF ISNPSEERLL GSSEYQEKIA NAIYQGLRSY FQSHPLQNVP KQENRPQKQE
NRPQASSVVN APASAPVKSA TPAVRNDAVT QRHTVARGET LSGIAAQYGV SMSTLRDLNS
LKNDVVWVGQ RLKIPGKAST PGVTKTPPAP KKSTVVIKHK VMRGDTLSAI AVRYGVSMKE
IQQVNNMTSG TVQLGQTLVI PST