| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0504 |
|---|
| Symbol | |
|---|
| ID | 8088828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 564201 |
|---|
| End bp | 565409 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644834574 |
|---|
| Product | cysteine desulfurase NifS |
|---|
| Protein accession | YP_002986137 |
|---|
| Protein GI | 242237956 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
|---|
| TIGRFAM ID | [TIGR03402] cysteine desulfurase NifS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACG TTTATCTGGA CAATAACGCC ACCACGCGCC TTGATCCGAT GGTGCTGGAG
GCGATGCTCC CCTTCCTGAC CGATTTTTAC GGCAACCCGT CGTCAATCCA TGATTTCGGC
ACGCCGTGCC GCGGTGCGCT GGAGCGGGCG CGGCAACAGG TGGCGAGCCT GCTTGGCGCC
CGCTACGACA GCGAGATCAT TTTCACCTCC TGCGCCACGG AGGCGACCTC CACCGCCATC
CATTCGGCGA CGGAGCTGAT GCCGGAACGG CGCGAAATCA TCACCACCGC CGTCGAGCAC
CCGGCTACGC TGGCGGTGTG CGAACATCTG GAACGCCAGG GATACCTTAT CCATCGTCTG
AGGGTCTCGC CGGAAGGCGA GCTGGATCTG GCGCAGTACC GTCAATTGCT GAGCGACCGC
GTCGCGCTGG TCAGCGTGAT GTGGGCCAAT AACGAAACCG GGGTGCAGTT CCCGGTACGG
GAGATGGCGG CGCTGGCGCA TGAATATGGC GCGCTGTTCC ACTGCGATGC GGTACAGGCG
GTGGGCAAGA TCCCGGTGGT GCTGTCCGCC ACCGAGATCG ACATGCTCTC CTGCTCGGCG
CACAAGATCC ACGGCCCGAA AGGGGTCGGG TGTCTGTATC TGCGGCGTGG TACGCGCTTT
CGGCCGTTGC TGCGCGGCGG CCATCAGGAA CGCGGACGCC GCGCCGGCAC CGAGAATATC
GCCGGGATCG TCGGCATGGG CAGCGCCTGC GAACTGGCGG AGGTGCATCT GCCGATGATG
ACGGCATCGG TGGCAACGTT GCGCGATAAG TTACAGGCCG GGCTGGAGCA GGCCATTCCC
AGCGTGATGG TGATGGGAGG AAACCAGCCG CGCACGCCGA ACACCCTCAA CATGGCGTTC
GAATTTATCG AAGGCGAGGC CATTCTGCTG TTGCTGAATC ATGCCGGCAT CGCCGCCTCC
AGCGGCAGCG CCTGCACATC GGGCTCGCTG GAGCCGTCCC ATGTGATGCG GGCGATGAAC
ATTCCCTACA CCGCAGCGCA CGGCAGTATC CGTTTCTCGT TGTCCCGTTA TACCCGTGAG
AAGGAAATCG ATTATGTGAT CGCGCAGTTG CCGCCGATCA TCGCACGTTT GCGTACCTTG
TCGCCCTACT GGCAGCAGGG GAAACCGCTG GCGGCGTCCG GCGCGGACTT CACCCCGACG
TATGGCTGA
|
|---|
| Protein sequence | MKNVYLDNNA TTRLDPMVLE AMLPFLTDFY GNPSSIHDFG TPCRGALERA RQQVASLLGA
RYDSEIIFTS CATEATSTAI HSATELMPER REIITTAVEH PATLAVCEHL ERQGYLIHRL
RVSPEGELDL AQYRQLLSDR VALVSVMWAN NETGVQFPVR EMAALAHEYG ALFHCDAVQA
VGKIPVVLSA TEIDMLSCSA HKIHGPKGVG CLYLRRGTRF RPLLRGGHQE RGRRAGTENI
AGIVGMGSAC ELAEVHLPMM TASVATLRDK LQAGLEQAIP SVMVMGGNQP RTPNTLNMAF
EFIEGEAILL LLNHAGIAAS SGSACTSGSL EPSHVMRAMN IPYTAAHGSI RFSLSRYTRE
KEIDYVIAQL PPIIARLRTL SPYWQQGKPL AASGADFTPT YG
|
|---|
| |