| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0493 |
|---|
| Symbol | |
|---|
| ID | 8088817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 551745 |
|---|
| End bp | 553313 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644834563 |
|---|
| Product | nitrogenase molybdenum-iron protein beta chain |
|---|
| Protein accession | YP_002986126 |
|---|
| Protein GI | 242237945 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
|---|
| TIGRFAM ID | [TIGR01286] nitrogenase molybdenum-iron protein beta chain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAA CCGCTGAGAA AACCGAACCC TGCTTCCCCT TGTTCGAGCA GGATGAATAC
CAGACGCTGT TTCGCAACAA ACGCGGAATG GAAGAAGCCC ACGACGAGCA GCGCGTGCGC
GAGGTCTTCG AGTGGACCAC CACCGAAGAG TACAAAGAAC TGAATTTCAA GCGCGAAGCG
CTGACCATTG ACCCGGCCAA AGCCTGTCAG CCGTTGGGCG CGGTGCTTTG CGCGCTCGGG
TTTGCCAATA CCTTGCCGTA TGTGCACGGC TCGCAAGGGT GCGTGGCGTA TTTCCGTACC
TATTTCAACC GTCACTTTAA GGAGCCGGTC GCCTGCGTAT CGGATTCCAT GACGGAAGAC
GCCGCGGTAT TCGGTGGTAA TAACAATATG AACAGCGGGT TACAGAACGC CAGCGCGCTG
TATAAGCCCG AGGTGATCGC CGTTTCCACC ACCTGTATGG CGGAAGTGAT CGGCGACGAC
TTGCAGGCAT TTATCGCCAA CGCCAAGAAA GACGGTTTTG TGGATGCAGA GATGCCGATC
CCTTATGCCC ACACGCCCAG TTTTATCGGC AGCCACACCA CCGGCTGGGA CAACATGTTC
GAAGGCTTCG CCCGCACCTT CACTGGCGGC GGGGACAACC ATTACCAGCC CGGCAGCCTG
CAACGGCTGA ATCTGGTTAC AGGGTTTGAA ACCTATCTCG GTAACTATCG GGTGATTAAA
CGGATGATGG CGCAGATGGA GGTGCCGGTC AGTCTGTTGT CCGATCCGTC CGAGGTGCTG
GATACCCCGG CCGACGGCCA CTACCGCATG TACGCCGGCG GCACGTCTCA GCAGGCGATG
CGCGAGGCGC CGAACGCCAT CGACACGTTG CTGTTGCAGC CGTGGCACCT GATCAAAACC
AAAAAAGTGG TGCAGGATGC GTGGCAACAG CCCGCGACCG ACGTGCCGGT GCCGATGGGG
CTGGCGGCTA CCGACCAACT GCTGATGACC GTCAGCGAGC TGACCGGCAA ACCGATCCCG
GATGTCTTGA CGCTGGAGCG CGGCCGGCTG GTGGACATGA TGCTCGACTC CCACACCTGG
CTGCACGGCA AGCGTTTTGG TTTGTACGGC GATCCGGATT TCGTCATGGG GTTGACCCAA
TTCCTGCTGG AACTGGGCTG CGAACCTACG GTGATCCTGT GCCACAACGG CAACAAGCGC
TGGCAGAAGG CGATGAAGAA AATGCTCGAT GCCTCGCCTT ACGGGCAGGA CAGCGAGGTG
TATATCAACT GCGATCTGTG GCACTTCCGT TCGCTGATGT TCACCAACAA ACCGGATTTC
ATGATCGGCA ACTCCTACGG CAAGTTCATC CAGCGCGATA CGCTGGCGAA GGGCGAGCAG
TTTGAAGTGC CGCTGATCCG GCTCGGGTTC CCGTTGTTTG ACCGTCACCA TCTGCATCGC
CAGACCACCT GGGGCTATGA AGGCGCGATG GCGATCCTCA CCACGTTGGT GAATGCGGTA
CTGGAAAAAC TGGATCACGA CACCATGAAG TTGGGCAAGA CCGATTACAA CTTCGATCTG
ATTCGTTAA
|
|---|
| Protein sequence | MSQTAEKTEP CFPLFEQDEY QTLFRNKRGM EEAHDEQRVR EVFEWTTTEE YKELNFKREA
LTIDPAKACQ PLGAVLCALG FANTLPYVHG SQGCVAYFRT YFNRHFKEPV ACVSDSMTED
AAVFGGNNNM NSGLQNASAL YKPEVIAVST TCMAEVIGDD LQAFIANAKK DGFVDAEMPI
PYAHTPSFIG SHTTGWDNMF EGFARTFTGG GDNHYQPGSL QRLNLVTGFE TYLGNYRVIK
RMMAQMEVPV SLLSDPSEVL DTPADGHYRM YAGGTSQQAM REAPNAIDTL LLQPWHLIKT
KKVVQDAWQQ PATDVPVPMG LAATDQLLMT VSELTGKPIP DVLTLERGRL VDMMLDSHTW
LHGKRFGLYG DPDFVMGLTQ FLLELGCEPT VILCHNGNKR WQKAMKKMLD ASPYGQDSEV
YINCDLWHFR SLMFTNKPDF MIGNSYGKFI QRDTLAKGEQ FEVPLIRLGF PLFDRHHLHR
QTTWGYEGAM AILTTLVNAV LEKLDHDTMK LGKTDYNFDL IR
|
|---|
| |