Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_0476 |
Symbol | |
ID | 8088718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 521024 |
End bp | 521566 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644834545 |
Product | Exonuclease RNase T and DNA polymerase III |
Protein accession | YP_002986109 |
Protein GI | 242237928 |
COG category | [A] RNA processing and modification |
COG ID | [COG1949] Oligoribonuclease (3'->5' exoribonuclease) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.459407 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTAAACG AAAACAACCT GATCTGGATC GATCTGGAAA TGACGGGGCT GGATCCCGAA CGCGACCGCA TTATTGAAAT CGCCACGCTG GTAACGGACG CCAATCTGAA TGTCCTGGCG GAAGGCCCGA CGTTGGCGGT GCACCAATCC GACAGCCAAC TGGCGCTGAT GGATGACTGG AACGTGCGTA CTCACACCGC CAGCGGGTTG GTGGATCGCG TCAAGGCCAG TACGTTTGAC GACCGCGCCG CCGAACTGGC GACCTTGCGC TTTCTGGAAC AGTGGGTGCC GGCGGGCAAA TCGCCGATCT GCGGCAACAG CATCGGCCAG GATCGCCGTT TTCTGTTCCG TTATATGCCG GAACTGGAAG CCTACTTCCA CTACCGTTAT CTGGATGTCA GTACGCTGAA AGAACTGGCC CGCCGCTGGA AGCCGGAGAT GCTGGCCGGT TTCAAAAAGC GCAACACCCA TCAGGCGATG GACGACATCC GCGAGTCCGT CGCGGAACTG GCGTATTACC GCGAGCACTT CATTCAACTG TAA
|
Protein sequence | MVNENNLIWI DLEMTGLDPE RDRIIEIATL VTDANLNVLA EGPTLAVHQS DSQLALMDDW NVRTHTASGL VDRVKASTFD DRAAELATLR FLEQWVPAGK SPICGNSIGQ DRRFLFRYMP ELEAYFHYRY LDVSTLKELA RRWKPEMLAG FKKRNTHQAM DDIRESVAEL AYYREHFIQL
|
| |