| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0444 |
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| Symbol | |
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| ID | 8088679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 473799 |
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| End bp | 474626 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644834507 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_002986078 |
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| Protein GI | 242237897 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0043385 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTGAAT ATCAATCTTT TGCTGTTTTC GGTAACCCTA TCGCGCATAG CAAGTCTCCG
CGTATTCATA CGTTATTTGC AGAGCAGTCG GGTATTTTAT TGAACTATGA ACGGTTGCAA
GCTCCCGTTG ATGAGTTTGA GCTGTACCTC CATGCATATT TTCAATCTGG CGCAGCCGGA
GCCAATATTA CCGCACCATT TAAAGAACGT GCCTGCGTCG TGGTAGATTC TCTGAGTCCG
CGAGCTGCCG AGGCATGTGC GGTTAATGTC GTAAAAAAAA TGGCGGATGG TACATTATTT
GGTGACAATA CTGATGGTAT CGGTCTGCTG AGTGACTTGC AGCAAAATGG GCTAATACAG
CCTGGTGATC GGGTACTGCT GGTGGGGGCT GGTGGTGCCG CGCGTGGGGT GATCCAACCT
TTGCTAGCTT ATGGTTGTTC TTTGATTGTC ACCAACAGAA CACTCGATAA AGCAGAAATG
CTGGCCAGTC ATTTCAGTGA ACAAGGAAAC ATACGCGCGT TGCCGCAATC ATCGCTGACG
AGCGAAATGT TCGATCTGAT CATCAATGCA ACCTCATCAG GTGTATACGG CAATATCCCC
GATCTTCCCC CCTCGTTGAT TAATGCTCAT GTTCGCTGTT ACGACATGTT TTATTTACCG
GAACCGACTC CGTTTTTGCA ATGGTGTACA CAGCAGGGGG CGGATAAATG CGTTGATGGG
CTAGGGATGC TGGTCTGGCA AGCAGCTCAT GCATTTAACT TGTGGCATGG CGTCATGCCG
CAGACTGAGC CTGTCATTCG ACAACTGAAA TTGGAATTTA TGTCGTGA
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| Protein sequence | MSEYQSFAVF GNPIAHSKSP RIHTLFAEQS GILLNYERLQ APVDEFELYL HAYFQSGAAG
ANITAPFKER ACVVVDSLSP RAAEACAVNV VKKMADGTLF GDNTDGIGLL SDLQQNGLIQ
PGDRVLLVGA GGAARGVIQP LLAYGCSLIV TNRTLDKAEM LASHFSEQGN IRALPQSSLT
SEMFDLIINA TSSGVYGNIP DLPPSLINAH VRCYDMFYLP EPTPFLQWCT QQGADKCVDG
LGMLVWQAAH AFNLWHGVMP QTEPVIRQLK LEFMS
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