Gene Dd703_0422 details

Gene Information

• Locus tag: Dd703_0422
• Symbol: rpsE
• ID: 8088657
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: +
• Start bp: 458555
• End bp: 459055
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 644834486
• Product: 30S ribosomal protein S5
• Protein accession: YP_002986057
• Protein GI: 242237876
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0728588
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTCACA TCGAGAAGCA AGCTGGCGAA CTGCAGGAAA AGCTGATCGC GGTTAATCGC 
GTATCTAAAA CTGTTAAAGG TGGTCGTATT TTCAGCTTCA CCGCACTGAC TGTAGTGGGT 
GATGGTAACG GCCGCGTGGG TTTTGGTTAC GGTAAAGCGC GTGAAGTTCC GGCAGCGATC 
CAGAAAGCGA TGGAAAAAGC CCGTCGCAAT ATGATTAACG TCGCGCTGAA TAGCGGTACT 
CTGCAGCATC CGGTTAAAGG TGCGCACACA GGGTCTCGCG TATTCATGCA GCCGGCTTCC 
GAAGGTACCG GTATCATCGC CGGTGGTGCA ATGCGCGCCG TTCTGGAAGT CGCAGGGGTT 
CATAACGTTT TGGCTAAAGC CTATGGTTCC ACTAACCCGA TCAACGTGGT TCGTGCAACT 
ATTGATGGCT TGGCAAACAT GAAGTCCCCG GAAATGGTCG CTGCCAAGCG TGGTAAATCC 
GTTGAAGAAA TTCTGGGGTA A 

 

Protein sequence

MAHIEKQAGE LQEKLIAVNR VSKTVKGGRI FSFTALTVVG DGNGRVGFGY GKAREVPAAI 
QKAMEKARRN MINVALNSGT LQHPVKGAHT GSRVFMQPAS EGTGIIAGGA MRAVLEVAGV 
HNVLAKAYGS TNPINVVRAT IDGLANMKSP EMVAAKRGKS VEEILG