Gene Dd703_0401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0401 
Symbol 
ID8088636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp448155 
End bp449339 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content55% 
IMG OID644834465 
Productelongation factor Tu 
Protein accessionYP_002986036 
Protein GI242237855 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000273455 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTAAAG AAAAATTTGA ACGTACAAAA CCGCACGTTA ACGTCGGTAC TATCGGCCAC 
GTTGACCATG GTAAAACAAC GCTGACCGCT GCCATCACCA CCGTTTTGGC TAAAACCTAC
GGTGGTCAGG CTCGCGCATT CGACCAGATC GACAACGCGC CGGAAGAAAA AGCGCGTGGT
ATCACCATCA ACACCTCTCA CGTTGAATAC GATACCCCGA CTCGTCACTA CGCACACGTT
GACTGCCCAG GGCACGCCGA CTACGTGAAA AACATGATCA CCGGTGCTGC CCAGATGGAC
GGCGCGATCC TGGTGGTGGC TGCAACTGAC GGCCCGATGC CGCAGACCCG TGAGCACATC
CTGCTGGGTC GCCAGGTAGG TGTTCCGTAC ATCATCGTGT TCCTGAACAA ATGCGACATG
GTTGATGACG AAGAGCTGCT GGAACTGGTT GAGATGGAAG TGCGCGAGCT GCTGTCTCAG
TACGACTTCC CGGGCGACGA CACGCCGGTA ATCCGCGGTT CCGCGCTGAA AGCGCTGGAA
GGCGATGCCG AGTGGGAAGC GAAAATCATC GAACTGGCCG AAGCCCTGGA CAGCTACATT
CCGGAACCGG AACGTGCGAT TGACAAGCCG TTCCTGCTGC CGATCGAAGA CGTATTCTCC
ATCTCCGGCC GTGGTACCGT TGTGACCGGT CGTGTAGAGC GCGGCATCAT CAAAGTGGGT
GAAGAAGTTG AAATCGTGGG TATCAAAGAA ACCACGAAAA CCACCTGTAC CGGTGTTGAA
ATGTTCCGCA AACTGCTGGA CGAAGGGCGT GCGGGCGAGA ACGTAGGTGT TCTGCTGCGT
GGTACCAAAC GTGATGAAGT TGAACGTGGT CAGGTACTGG CTAAACCGGG CTCAATCAAG
CCGCACACTC AGTTCGAATC TGAAGTGTAT ATTCTGAGCA AAGATGAAGG TGGCCGTCAT
ACGCCGTTCT TTAAAGGCTA CCGTCCGCAG TTCTACTTCC GTACCACTGA CGTGACAGGC
ACCATCGAAC TGCCGGAAGG CGTGGAAATG GTGATGCCGG GCGACAACAT CAAGATGGTC
GTAAACCTTA TCGCGCCGAT CGCGATGGAC GACGGTCTGC GTTTCGCTAT CCGTGAAGGC
GGCCGTACAG TAGGCGCTGG CGTGGTTGCT AAAGTTATCG CTTAA
 
Protein sequence
MSKEKFERTK PHVNVGTIGH VDHGKTTLTA AITTVLAKTY GGQARAFDQI DNAPEEKARG 
ITINTSHVEY DTPTRHYAHV DCPGHADYVK NMITGAAQMD GAILVVAATD GPMPQTREHI
LLGRQVGVPY IIVFLNKCDM VDDEELLELV EMEVRELLSQ YDFPGDDTPV IRGSALKALE
GDAEWEAKII ELAEALDSYI PEPERAIDKP FLLPIEDVFS ISGRGTVVTG RVERGIIKVG
EEVEIVGIKE TTKTTCTGVE MFRKLLDEGR AGENVGVLLR GTKRDEVERG QVLAKPGSIK
PHTQFESEVY ILSKDEGGRH TPFFKGYRPQ FYFRTTDVTG TIELPEGVEM VMPGDNIKMV
VNLIAPIAMD DGLRFAIREG GRTVGAGVVA KVIA