Gene Dd703_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0400 
Symbol 
ID8088635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp445969 
End bp448083 
Gene Length2115 bp 
Protein Length704 aa 
Translation table11 
GC content52% 
IMG OID644834464 
Productelongation factor G 
Protein accessionYP_002986035 
Protein GI242237854 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000255179 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGTA CAACACCCAT TGCGCGCTAT CGTAACATCG GTATCAGCGC ACACATCGAC 
GCCGGTAAGA CCACTACTAC TGAACGTATC CTGTTCTACA CCGGTGTGAA CCACAAAATC
GGTGAAGTTC ATGATGGCGC CGCCACCATG GACTGGATGG AGCAGGAACA GGAGCGTGGT
ATCACTATTA CCTCCGCTGC GACCACTGCT TTCTGGTCTG GTATGGCTAA GCAGTATGAA
CCGCACCGTA TCAACATCAT CGACACCCCG GGGCACGTTG ACTTCACTAT TGAAGTAGAA
CGTTCCATGC GTGTTCTGGA TGGCGCAGTG ATGGTTTACT GTGCAGTAGG TGGTGTTCAG
CCGCAGTCTG AAACCGTATG GCGTCAGGCA AACAAATATA AAGTTCCGCG TATTGCGTTC
GTTAACAAAA TGGATCGTAT GGGCGCGAAC TTCCTGAAAG TTGTTGATCA GATTAAAGTG
CGCTTGGGTG CGAACCCGGT TCCGTTGCAG TTGGCTATCG GCGCAGAAGA ACACTTCACC
GGTGTGGTTG ACCTGGTGAA AATGAAAGCC ATCAACTGGA ATGAAGCTGA TCAGGGCGTT
ACCTTCACTT ATGAAGATAT TCCTGCTGAT ATGCAGGATC TGGCCGCTGA ATGGCACCAG
AATTTGATCG AGTCTGCCGC AGAAGCTTCA GAAGAGCTGA TGGAGAAATA TCTGGGCGGT
GAGGAACTGA CTGAAGCTGA AATCAAAGGT GCTTTGCGTC AGCGCGTTCT GAACAACGAA
ATCATCCTGG TAACCTGTGG TTCTGCGTTC AAGAACAAGG GCGTACAGGC AATGCTGGAC
GCCGTCATCG ATTACCTGCC GGCTCCGACT GACGTACCGG CAATCAACGG TATGCTGGAC
GACGGTAAAG ATACGCCGGC TGAGCGTCAC GCTAGCGATG ATGAGCCTTT CTCTGCATTG
GCGTTCAAAA TCGCAACCGA CCCGTTTGTG GGGAACCTGA CGTTCTTCCG TGTGTACTCT
GGTGTGGTTA ATTCCGGTGA CACCGTACTG AACTCAGTAA AATCTGAGCG TGAGCGTTTT
GGCCGTATCG TTCAGATGCA CGCCAACAAA CGTGAAGAGA TCAAAGAAGT TCGTGCGGGC
GATATCGCAG CTGCTATCGG TCTGAAAGAT GTGATCACCG GTGACACCTT GTGTGACCCG
GACAACCCGA TCATTCTGGA ACGTATGGAA TTCCCGGAGC CGGTTATCTC CATCGCGGTA
GAGCCGAAAA CCAAAGCTGA CCAAGAGAAA ATGGGTCTGG CTCTGGGCCG TCTGGCGAAG
GAAGACCCGT CTTTCCGTGT ATGGACTGAC GAAGAATCTA ACCAGACCAT CATCGCGGGC
ATGGGTGAGC TGCACCTCGA CATCATCGTT GACCGCATGA AGCGTGAATT CAACGTGGAA
GCAAACGTGG GTAAACCGCA GGTTGCTTAC CGTGAAGCGA TTCGCGCCAA AGTTACCGAT
ATTGAAGGTA AACATGCCAA GCAGTCTGGT GGTCGTGGTC AGTATGGTCA TGTCGTTATC
GATATGTATC CGCTGGAGCC GGGCTCAAAC CCGAAAGGTT ATGAGTTCGT CAACGATATC
AAAGGTGGTG TGATTCCTGG CGAATACATC CCGGCCGTTG ATAAAGGCAT CCAGGAACAG
CTGAAAGCCG GTCCGCTGGC TGGCTTCCCG GTGGTTGATC TCGGCGTGCG TCTGCACTTC
GGTTCTTACC ATGACGTTGA CTCCTCTGAA CTGGCGTTTA AACTGGCCGC TTCTCTCGCC
TTTAAAGCCG CGTTCAGTAA AGCGAATCCT GTTCTGCTTG AGCCTATCAT GAAGGTTGAA
GTAGAAACGC CGGAAGAGAA CACTGGCGAC GTCATCGGTG ACCTGAGCCG CCGTCGTGGT
ATGCTGCGTG GTCAAGAATC CAACGTTACT GGCGTTGTGA TTCACGCTGA AGTTCCGTTG
TCTGAAATGT TCGGATACGC AACTCAGCTG CGTTCTCTGA CCAAAGGTCG TGCTTCTTAC
TCCATGGAGT TCCTGAAGTA CGATGATGCG CCGAACAACG TTGCCCAGGC CGTTATTGAA
GCCCGTGGTA AGTAA
 
Protein sequence
MARTTPIARY RNIGISAHID AGKTTTTERI LFYTGVNHKI GEVHDGAATM DWMEQEQERG 
ITITSAATTA FWSGMAKQYE PHRINIIDTP GHVDFTIEVE RSMRVLDGAV MVYCAVGGVQ
PQSETVWRQA NKYKVPRIAF VNKMDRMGAN FLKVVDQIKV RLGANPVPLQ LAIGAEEHFT
GVVDLVKMKA INWNEADQGV TFTYEDIPAD MQDLAAEWHQ NLIESAAEAS EELMEKYLGG
EELTEAEIKG ALRQRVLNNE IILVTCGSAF KNKGVQAMLD AVIDYLPAPT DVPAINGMLD
DGKDTPAERH ASDDEPFSAL AFKIATDPFV GNLTFFRVYS GVVNSGDTVL NSVKSERERF
GRIVQMHANK REEIKEVRAG DIAAAIGLKD VITGDTLCDP DNPIILERME FPEPVISIAV
EPKTKADQEK MGLALGRLAK EDPSFRVWTD EESNQTIIAG MGELHLDIIV DRMKREFNVE
ANVGKPQVAY REAIRAKVTD IEGKHAKQSG GRGQYGHVVI DMYPLEPGSN PKGYEFVNDI
KGGVIPGEYI PAVDKGIQEQ LKAGPLAGFP VVDLGVRLHF GSYHDVDSSE LAFKLAASLA
FKAAFSKANP VLLEPIMKVE VETPEENTGD VIGDLSRRRG MLRGQESNVT GVVIHAEVPL
SEMFGYATQL RSLTKGRASY SMEFLKYDDA PNNVAQAVIE ARGK