| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0389 |
|---|
| Symbol | |
|---|
| ID | 8088624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 437546 |
|---|
| End bp | 438526 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644834454 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_002986025 |
|---|
| Protein GI | 242237844 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.503791 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGACG ACGCCACGGA TTCTCGAACC AGCGAAAATG CTGATGTAAA GGCGCGTGAC
GTGGCGTTTG CCCACAGCGC GCCGCGCTAT GGGCGTCTGG TTTCCTGGAT TGTGGTTTCG
CTGGTCGCCG CCGACTTTTT TTGGCTGGTG GCGACCAACC CCAACTTTGA ATGGCAAGTC
GTGGTGCAGT GGTTTACCGA AGGTTCGGTG ATGAAAGGGC TGGAGGTCAC GCTGGGGCTG
ACGGTTATCG CCATGCTGCT CGGTGTTGCG TTGGGGTTGC TGTTGGCGGT GGCCCGCTTG
TCGGACAACC GGTTGCTGAG TGGGTTGTCT GGTTTGTATA TCTGGTTCTT CCGGGGGACG
CCGCTGCTGG TGCAACTGAT TTTCTGGTAC AACCTGTCCA CGCTGTTTCC GACCATTTCG
TTGGCGATCC CCATTACCGG CCCAACGTTC ATCAGCTGGA AAACCAATGA TCTGATTACG
CCGCTGACCG CTGCTATCGC CGGTCTGGCG TTGAACGAAG CGGCTTACAT GGCGGAGATT
ATCCGCGCTG GGCTGTTGTC GGTCGATCAA GGGCAGATAG AAACCACGCA GGCGTTCGGT
ATGAGCCGGG TGCGGGCGCT GCGTCGCATT ATTATTCCCC AGGCGATGCG CGCCATTATC
CCACCGACCG GCAACCAGTT AATCAGCATG ATCAAAGCGA CCTCGTTAGT GAGCGTCATC
GCTATGGGCG ACCTGCTGTA TTCGGTGCAG GCCATCTATA ACCGAACCTT CGAAATTATT
CCGATGCTGA TGGTGGCGGT GATCTGGTAT CTGCTGATTA CTTCGATACT GAATGTCGGC
CAGTCGGCGA TCGAACGTTA TTACGCCCGC GGCTCGCGCC GCACGGTGTC GGTCGGCAAA
CGGCGACAAA CGTCGGGCCA GGAACAGGAG CGCGTGTCTG CCGTCGCCGG GCAGCCCTGG
ATGAAGAAGG AGGAGGCATG A
|
|---|
| Protein sequence | MIDDATDSRT SENADVKARD VAFAHSAPRY GRLVSWIVVS LVAADFFWLV ATNPNFEWQV
VVQWFTEGSV MKGLEVTLGL TVIAMLLGVA LGLLLAVARL SDNRLLSGLS GLYIWFFRGT
PLLVQLIFWY NLSTLFPTIS LAIPITGPTF ISWKTNDLIT PLTAAIAGLA LNEAAYMAEI
IRAGLLSVDQ GQIETTQAFG MSRVRALRRI IIPQAMRAII PPTGNQLISM IKATSLVSVI
AMGDLLYSVQ AIYNRTFEII PMLMVAVIWY LLITSILNVG QSAIERYYAR GSRRTVSVGK
RRQTSGQEQE RVSAVAGQPW MKKEEA
|
|---|
| |