Gene Dd703_0349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0349 
Symbol 
ID8088584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp399001 
End bp399678 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content53% 
IMG OID644834415 
ProductThiJ/PfpI domain protein 
Protein accessionYP_002985986 
Protein GI242237805 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTAT TGATGGTTTT AACTTCTCAC GATCAATTAG GTCATACCGG CAAGAAAACG 
GGGTTTTGGC TTGAAGAGTT CGCGGCACCT TATTACACCT TCAAAGACGC CGGGATGAAT
GTCGTATTGG CCTCGCCGGC TGGTGGACAA CCGCCGTTGG ATCCGAAAAG CGATTTACCC
GATTTTCAGA CCGCGTCGAC CCATCGTTTC AAAGCCGATG CCGCGTCACA GCATGCGTTG
GCCACCACAG TGAAGCTGGA TACCGTAAAC ATGGATGATT TTGATGCGGT GTTCTATCCC
GGTGGCCACG GCCCGCTGTG GGATCTGGCG GAATCCGCAG ACTCCATCGC ACTGATCGAA
GCCTTCGAGC GCGCCGGCAA ACCCATTGGC TTCGTCTGCC ATGCACCTGG CGTACTGCGT
CATGTAAAAG CAGCCAACGG CGATCCGTTG ATCAAAGGGC GCCATGTCAC CGGATTTACG
AATAGCGAAG AAGCTGCGGT TGAACTCAGC GCTATCGTCC CCTTTCTGAT CGAAGATGAA
TTCCAGCAGC TGGGTGGGCT GTATACCAAA GGCTCAGACT GGACGCCTTA TATCGTTGAA
GACGGTAAAT TGATTACCGG CCAGAACCCG GCCAGTTCAG AAGGTGTCGC TGAAGCATTG
TTAAAACAAC TTCAGTGA
 
Protein sequence
MNVLMVLTSH DQLGHTGKKT GFWLEEFAAP YYTFKDAGMN VVLASPAGGQ PPLDPKSDLP 
DFQTASTHRF KADAASQHAL ATTVKLDTVN MDDFDAVFYP GGHGPLWDLA ESADSIALIE
AFERAGKPIG FVCHAPGVLR HVKAANGDPL IKGRHVTGFT NSEEAAVELS AIVPFLIEDE
FQQLGGLYTK GSDWTPYIVE DGKLITGQNP ASSEGVAEAL LKQLQ