Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_0349 |
Symbol | |
ID | 8088584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 399001 |
End bp | 399678 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644834415 |
Product | ThiJ/PfpI domain protein |
Protein accession | YP_002985986 |
Protein GI | 242237805 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGTAT TGATGGTTTT AACTTCTCAC GATCAATTAG GTCATACCGG CAAGAAAACG GGGTTTTGGC TTGAAGAGTT CGCGGCACCT TATTACACCT TCAAAGACGC CGGGATGAAT GTCGTATTGG CCTCGCCGGC TGGTGGACAA CCGCCGTTGG ATCCGAAAAG CGATTTACCC GATTTTCAGA CCGCGTCGAC CCATCGTTTC AAAGCCGATG CCGCGTCACA GCATGCGTTG GCCACCACAG TGAAGCTGGA TACCGTAAAC ATGGATGATT TTGATGCGGT GTTCTATCCC GGTGGCCACG GCCCGCTGTG GGATCTGGCG GAATCCGCAG ACTCCATCGC ACTGATCGAA GCCTTCGAGC GCGCCGGCAA ACCCATTGGC TTCGTCTGCC ATGCACCTGG CGTACTGCGT CATGTAAAAG CAGCCAACGG CGATCCGTTG ATCAAAGGGC GCCATGTCAC CGGATTTACG AATAGCGAAG AAGCTGCGGT TGAACTCAGC GCTATCGTCC CCTTTCTGAT CGAAGATGAA TTCCAGCAGC TGGGTGGGCT GTATACCAAA GGCTCAGACT GGACGCCTTA TATCGTTGAA GACGGTAAAT TGATTACCGG CCAGAACCCG GCCAGTTCAG AAGGTGTCGC TGAAGCATTG TTAAAACAAC TTCAGTGA
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Protein sequence | MNVLMVLTSH DQLGHTGKKT GFWLEEFAAP YYTFKDAGMN VVLASPAGGQ PPLDPKSDLP DFQTASTHRF KADAASQHAL ATTVKLDTVN MDDFDAVFYP GGHGPLWDLA ESADSIALIE AFERAGKPIG FVCHAPGVLR HVKAANGDPL IKGRHVTGFT NSEEAAVELS AIVPFLIEDE FQQLGGLYTK GSDWTPYIVE DGKLITGQNP ASSEGVAEAL LKQLQ
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