Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_0271 |
Symbol | |
ID | 8088506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 307333 |
End bp | 307740 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644834339 |
Product | transcriptional regulator NikR, CopG family |
Protein accession | YP_002985910 |
Protein GI | 242237729 |
COG category | [K] Transcription |
COG ID | [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain |
TIGRFAM ID | [TIGR02793] nickel-responsive transcriptional regulator NikR |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACGAC TGACAATCTC CATGGACGAT CAACTGGCCG CCGATTTTGA TGACCTGATG GCGCGCAAAG GGTACGCCAA CCGTTCGGAA GCGTTCCGCG ATATGCTGCG TCGCGAGTTG GGTGAAATGA CGGTGGCGTC GGATCGCAAT GGCGAATGCG TAGCGGTACT GAGCTATGTC TACGACCACC ACGAACGTCA ATTGTCCAGC CGGCTGGCGG GCATGCAGCA CGATCATCAC AGCCTGACCG TTTCCACTAT GCATACCCAT CTGAGCCATG ACGAATGCGT GGAGACGGTG ATTCTGCGCG GCCAAACCTG GCAAGTGGAA CAGTTCGCCG AGCAGGTGAT CGCCGAGACG GGCGTGCGCC ACGGCAGGTT GAACCTGATC CCGCTATACC TCGAATAA
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Protein sequence | MQRLTISMDD QLAADFDDLM ARKGYANRSE AFRDMLRREL GEMTVASDRN GECVAVLSYV YDHHERQLSS RLAGMQHDHH SLTVSTMHTH LSHDECVETV ILRGQTWQVE QFAEQVIAET GVRHGRLNLI PLYLE
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