Gene Dd703_0271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0271 
Symbol 
ID8088506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp307333 
End bp307740 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content58% 
IMG OID644834339 
Producttranscriptional regulator NikR, CopG family 
Protein accessionYP_002985910 
Protein GI242237729 
COG category[K] Transcription 
COG ID[COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain 
TIGRFAM ID[TIGR02793] nickel-responsive transcriptional regulator NikR 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACGAC TGACAATCTC CATGGACGAT CAACTGGCCG CCGATTTTGA TGACCTGATG 
GCGCGCAAAG GGTACGCCAA CCGTTCGGAA GCGTTCCGCG ATATGCTGCG TCGCGAGTTG
GGTGAAATGA CGGTGGCGTC GGATCGCAAT GGCGAATGCG TAGCGGTACT GAGCTATGTC
TACGACCACC ACGAACGTCA ATTGTCCAGC CGGCTGGCGG GCATGCAGCA CGATCATCAC
AGCCTGACCG TTTCCACTAT GCATACCCAT CTGAGCCATG ACGAATGCGT GGAGACGGTG
ATTCTGCGCG GCCAAACCTG GCAAGTGGAA CAGTTCGCCG AGCAGGTGAT CGCCGAGACG
GGCGTGCGCC ACGGCAGGTT GAACCTGATC CCGCTATACC TCGAATAA
 
Protein sequence
MQRLTISMDD QLAADFDDLM ARKGYANRSE AFRDMLRREL GEMTVASDRN GECVAVLSYV 
YDHHERQLSS RLAGMQHDHH SLTVSTMHTH LSHDECVETV ILRGQTWQVE QFAEQVIAET
GVRHGRLNLI PLYLE