Gene Dd703_0222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0222 
Symbol 
ID8088781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp251394 
End bp252158 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content49% 
IMG OID644834290 
Productgluconate 5-dehydrogenase 
Protein accessionYP_002985861 
Protein GI242237680 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA TATTTTCACT GGAAAATAAA AAAGTTTTGA TTACCGGATC GGCCCAGGGT 
ATTGGTTTCC TTTTGGCTAA AGGATTGGCG GAACAGGGTG CTGAGATTAT CGTTAATGAT
ATTACCGCCG AGCGTGCGGA ACATGCCGTT GCGCAATTAA CGGCGCAAGG GTATCGCGCT
TACGCCGCAC CGTTTGACGT TACCCGCTGC CAGGAAGTGA ATGAAGCCAT TGACGGAATA
GAAAAAAATA TTGGCGCAAT AGATGTACTG ATTAATAACG CGGGTATTCA GCGCCGCCAT
CCTTTTACTG AATTTCCGGA AAATGAGTGG AATGATGTGA TTGCGGTGAA TCAGTCCGCC
GTCTTTTTTG TTTCGCAGGC GGTGGCCCGT AACATGGTGG AGCGCCGTGC CGGAAAAATC
GTCAATATTT GCTCCATGCA AAGTGAATTG GGTCGAGACA CCATTACGCC GTATGCCGCA
TCGAAAGGGG CGGTAAAAAT GCTGACGCGC GGAATGTGTG TGGAACTGGC GCGTTACAAT
ATTCAGGTGA ATGGTATTGC TCCGGGTTAT TTCAAAACAG AAATGACCAA GGCGTTGGTG
GAAAATCAGG AATTCACCGC ATGGCTGACG AAGCGCACAC CCGCAGCCCG TTGGGGCAAT
CCTGAGGAGT TAATCGGCGC GGCGGTTTTC CTGTCATCCG GCGCATCCAA CTTTGTAAAC
GGGCATTTAT TGTTCGTCGA CGGCGGTATG TTGGTCGCGG TTTAA
 
Protein sequence
MKNIFSLENK KVLITGSAQG IGFLLAKGLA EQGAEIIVND ITAERAEHAV AQLTAQGYRA 
YAAPFDVTRC QEVNEAIDGI EKNIGAIDVL INNAGIQRRH PFTEFPENEW NDVIAVNQSA
VFFVSQAVAR NMVERRAGKI VNICSMQSEL GRDTITPYAA SKGAVKMLTR GMCVELARYN
IQVNGIAPGY FKTEMTKALV ENQEFTAWLT KRTPAARWGN PEELIGAAVF LSSGASNFVN
GHLLFVDGGM LVAV