| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0192 |
|---|
| Symbol | |
|---|
| ID | 8088747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 215424 |
|---|
| End bp | 216623 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644834256 |
|---|
| Product | Mandelate racemase/muconate lactonizing protein |
|---|
| Protein accession | YP_002985831 |
|---|
| Protein GI | 242237650 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTCCGA CTATTATTAC TCACATTAAA TGTCTTATCA CTAAACCGGA CAGACATAAT
CTGGTTACAG TCATCGTCGA TACCAATAAG GGCATTACTG GTTATGGCTG CGCGACCTTC
CAGCAACGGC CTCTGGCAGT GAAAACGCTG ATAGATGAAT ATTTATGCCC ATTGCTGGTG
GGAAAAGATG CAAACCATAT CGAAGATCTC TGGCATTTGA TGATGGTCAA TGCCTACTGG
CGTAACGGGC CGGTTATCAA CAATGCCATA GCGGGCATTG ATATGGCTTT GTGGGATATT
AAAGGCAAAC TGGCTGATAT GCCGTTGTAT CAGCTGTTCG GAGGAAAATC CCGTGATGCC
ATTACCCTGT ATACCCATGC GGCCAGCGAG ACGTTGACGG GGTTGTTTGA TGAGGTCGAT
CGCCACTACG CGGACGGTTA TCGGCATATT CGGTGCCAGC TGGGTTTTTA TGGCGGGACG
CCGGAGCAAC TGCATTCCAC GCGCCAGCCG ACGCCCGGCG CCTATTACGA TCAGGAGCAG
TACATCGCCA ATACGTTGTC CATGTTCCGG GCCTTACGGG AACGTTATGG CGACAAGTTT
CATATTCTGC ATGACGTGCA CGAGCGATTA TTTCCGTCTC AGGCCGTGCA GTTTGCCCAG
GCGGTGGAAG GTTATCGACC TTACTTCATC GAGGATATTC TTCCTCCGGC ACAGAACGGT
TGGTTGGCTC AAATCCGTGC TCAAACATCG GTGCCGCTGG CGACAGGTGA GCTGTTTAAC
AATCCGGCGG AATGGCAGGA TCTGGTGATC CATCGCCACA TTGATTTCAT CCGTTGCCAT
GTCTCTCAGA TAGGCGGTAT TTCTCCCGCA TTGAAACTGG CGGCATTTTG CCAGAACTTT
GGTATTCGGC TGGCATGGCA TTGCCCACCG GATATGACGC CAATTGGCGC GGCGGTGAAC
TTACATCTCA ATATCCATCT GCATAATGCG GCGATTCAGG AATATATCGC TTATCCGGAA
AACACCCGGC GGGTTTTCCC TGATTCGCCA ATACCGGATA ACGGGTATTT ATATCCTATA
GAAAAAGCCG GTATCGGCGT CGAAATGGCG GAGGATGTGG CGCAGGCGTT TCCCGTTGTT
TATCGGCCGC ACGAATGGAC TCAAAGCCGC CTGCCGGATG GTTCGTTGCA TACGCCATAG
|
|---|
| Protein sequence | MTPTIITHIK CLITKPDRHN LVTVIVDTNK GITGYGCATF QQRPLAVKTL IDEYLCPLLV
GKDANHIEDL WHLMMVNAYW RNGPVINNAI AGIDMALWDI KGKLADMPLY QLFGGKSRDA
ITLYTHAASE TLTGLFDEVD RHYADGYRHI RCQLGFYGGT PEQLHSTRQP TPGAYYDQEQ
YIANTLSMFR ALRERYGDKF HILHDVHERL FPSQAVQFAQ AVEGYRPYFI EDILPPAQNG
WLAQIRAQTS VPLATGELFN NPAEWQDLVI HRHIDFIRCH VSQIGGISPA LKLAAFCQNF
GIRLAWHCPP DMTPIGAAVN LHLNIHLHNA AIQEYIAYPE NTRRVFPDSP IPDNGYLYPI
EKAGIGVEMA EDVAQAFPVV YRPHEWTQSR LPDGSLHTP
|
|---|
| |