Gene Dd703_0179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0179 
Symbol 
ID8088734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp199013 
End bp199489 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content55% 
IMG OID644834244 
Productpreprotein translocase subunit SecB 
Protein accessionYP_002985819 
Protein GI242237638 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1952] Preprotein translocase subunit SecB 
TIGRFAM ID[TIGR00809] protein-export chaperone SecB 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAC AAAACAACGT CGAAGTGAAT TTCCAGATCC AGCGCATTTA CACCAAAGAT 
ATCTCTTTCG AAGCGCCGAA TGCGCCGCAG GTCTTTCAGC AGGAGTGGAA TCCGGAAGTC
AAACTGGATC TGGACACGGC CTCAACCCAA CTGGCTGACG ACGTGTATGA AGTGGTGCTG
CGCGTGACCG TGACTGCCAC GCTCGGCGAA GAAACGGCAT TTTTGTGTGA AGTTCAGCAG
GCGGGCATCT TCACCGTCGG CGGTATGGAA GGCCAGCAGT TGGCTCACTG CCTGGGCGCT
TACTGCCCGA ATGTACTGTT CCCGTATGTG CGCGAATGCA TCACCAGCCT GGTTTCCCGT
GGCACGTTCC CGCAATTAAA TCTGGCGCCG GTCAACTTTG ATGCCCTGTT CATGAACTAT
CTGGAACAGC AGGCCGCCAA CGAAGGCGCG GAACAGAATC AGACGCTGGA TGCCTGA
 
Protein sequence
MSEQNNVEVN FQIQRIYTKD ISFEAPNAPQ VFQQEWNPEV KLDLDTASTQ LADDVYEVVL 
RVTVTATLGE ETAFLCEVQQ AGIFTVGGME GQQLAHCLGA YCPNVLFPYV RECITSLVSR
GTFPQLNLAP VNFDALFMNY LEQQAANEGA EQNQTLDA