| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0173 |
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| Symbol | rfaD |
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| ID | 8088728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | - |
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| Start bp | 191970 |
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| End bp | 192902 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644834238 |
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| Product | ADP-L-glycero-D-mannoheptose-6-epimerase |
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| Protein accession | YP_002985813 |
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| Protein GI | 242237632 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.184185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTATCG TGACTGGCGG CGCCGGTTTC ATCGGCAGCA ACATCGTGAA GGCGCTGAAT
GACGCCGGAC ACCGGGATAT TCTGGTGGTT GATAACCTCA AGGACGGCAC TAAATTCGTC
AATCTGGTCG ATCTGGATAT CGCCGACTAC ATGGACAAAG AAGATTTCAT CGCCGGTATT
ATGGCCGGCG ATGATTTTGG CGATATCGAT GCCGTTTTCC ACGAGGGCGC CTGCTCTTCC
ACCACCGAGT GGGATGGCAA GTATATGATG GAAAACAACT ACCAATACTC AAAGGAGCTG
CTGCACTACT GTCTGGAACG CAGCATTCCC TTCCTTTATG CGTCCTCCGC CGCCACCTAT
GGCGGCCGGG TCGACAACTT CGTGGAAAAT CGCCAGTACG AACAACCGCT GAACGTCTAC
GGCTATTCCA AATTCCTGTT CGATCAGTAC GTGCGCGACA TTCTGCCGGA TGCGGATTCT
CAGGTATGTG GCTTCCGTTA TTTCAATGTC TACGGCCCGC GCGAAGGCCA TAAAGGCAGC
ATGGCCAGCG TGGCGTTCCA TCTGAACAAC CAGATCAATC AGGGTGAAAA CCCGAAACTG
TTCTCCGGCA GCGAGAACTT TAAACGTGAT TTCATCTACG TCGGCGATGT CGCCGCCGTC
AACCTGTGGT TCTGGCAACA CGGCGTTTCC GGCATTTTCA ACTGTGGTAC TGGCCGCGCC
GAGTCCTTCC AGGCGGTGGC CGATGCGGTA CTGGCGTACC ATCAGCAAGG CAGCCTGGAG
TACATTCCTT TCCCGGAAAA ACTGAAAGGC CGCTATCAGG CATACACCCA GGCCGATCTG
ACCAACCTGC GCGGCGCCGG CTATGACAAA CCGTTCAAAA CGGTGGCGGA AGGCGTGGCC
GATTATATGG CCTGGCTGAA TCGCAGCGTC TGA
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| Protein sequence | MIIVTGGAGF IGSNIVKALN DAGHRDILVV DNLKDGTKFV NLVDLDIADY MDKEDFIAGI
MAGDDFGDID AVFHEGACSS TTEWDGKYMM ENNYQYSKEL LHYCLERSIP FLYASSAATY
GGRVDNFVEN RQYEQPLNVY GYSKFLFDQY VRDILPDADS QVCGFRYFNV YGPREGHKGS
MASVAFHLNN QINQGENPKL FSGSENFKRD FIYVGDVAAV NLWFWQHGVS GIFNCGTGRA
ESFQAVADAV LAYHQQGSLE YIPFPEKLKG RYQAYTQADL TNLRGAGYDK PFKTVAEGVA
DYMAWLNRSV
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