Gene Dd703_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0172 
Symbol 
ID8088727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp190885 
End bp191937 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content62% 
IMG OID644834237 
ProductADP-heptose:LPS heptosyltransferase II 
Protein accessionYP_002985812 
Protein GI242237631 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID[TIGR02195] lipopolysaccharide heptosyltransferase II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.063279 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTC TGGTTATCGG CCCGTCTTGG GTGGGCGATA TGATGATGTC CCACAGTCTG 
TATCGCACCC TTAAGGCCGA GCATCCGGAT GCCATCATTG ACGTGATGGC TCCCGCCTGG
TGTCGCCCAT TGCTGGCCAG GATGCCCGAA GTCAACCAGG CGCTGGCGAT GCCGTTGGGC
CATGGCGCAC TGGCGTTGAG AGAGCGCCGC CAGTTGGGGC GCGGCCTGCG GGAGCAGGAT
TACGATCGCG CCATTGTGCT GCCCAATTCC TTCAAGTCCG CGCTGGTGCC GTTTTTTGCC
GCCATCCCTC GTCGCACCGG CTGGCGCGGC GAAATGCGTT ATGGTCTGCT CAACGACATC
CGGCCCCTCG ACAAAACGGC CTTTCCCCTG ATGGTGCAGC GTTACGTGGC GCTGGCCTAT
GCGCGGGAGA GCATCCGCCG GGCTGATGAC CTTCCGCAAC CGCTGTTGTG GCCGCAGTTG
CAGGTCAGTG AAACGGAGAT CGCCGATGTT ACGTCCGCGT TCAATCTGAT GGATGCGCGA
CCATCGATCG GTTTTTGTCC CGGCGCGGAG TTTGGCCCCG CCAAACGCTG GCCGCATTAC
CATTACGGCG CGCTGGCGCA GAGGCTGATT GAACAGGGTT ATCAGGTCAT CCTGTTCGGC
TCCGCCAATG ATCGTCAGGC CGGAGAAGAT ATCCGCCAGA CGCTCGACGA GAGTACCCGT
GAATACTGTA TTAATCTGTC CGGGCAGACC TCGCTCGATC AGGCGGTGGT GTTGCTTGCC
GCTTGTCAGG CCGTCGTCAG TAACGATTCC GGCCTGATGC ACGTCGCCGC CGCGCTCGGC
CGGCCGCTGG TCGCACTGTA TGGCCCCAGC AGCCCGGATT TCACGCCGCC GCTGTCCCAT
CAGGCTCGGG TTATCCGGCT GATTACCGGC TACCACCGGG TGCGCAAGGG CGATGCCGAA
CAGGGATACC ACCAAAGTCT GATCGACATA CAGCCCTCGC AAGTGCTGGC TGCACTGGCC
GATTATTTGC CCGGACAGGG AGAACCCGCA TGA
 
Protein sequence
MKILVIGPSW VGDMMMSHSL YRTLKAEHPD AIIDVMAPAW CRPLLARMPE VNQALAMPLG 
HGALALRERR QLGRGLREQD YDRAIVLPNS FKSALVPFFA AIPRRTGWRG EMRYGLLNDI
RPLDKTAFPL MVQRYVALAY ARESIRRADD LPQPLLWPQL QVSETEIADV TSAFNLMDAR
PSIGFCPGAE FGPAKRWPHY HYGALAQRLI EQGYQVILFG SANDRQAGED IRQTLDESTR
EYCINLSGQT SLDQAVVLLA ACQAVVSNDS GLMHVAAALG RPLVALYGPS SPDFTPPLSH
QARVIRLITG YHRVRKGDAE QGYHQSLIDI QPSQVLAALA DYLPGQGEPA