| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0170 |
|---|
| Symbol | |
|---|
| ID | 8088725 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 188822 |
|---|
| End bp | 189907 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644834235 |
|---|
| Product | lipopolysaccharide heptosyltransferase III |
|---|
| Protein accession | YP_002985810 |
|---|
| Protein GI | 242237629 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II
[TIGR02201] lipopolysaccharide heptosyltransferase III, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.792363 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCTCAC CGCGCAACGT TGAATTCAGG CGCATCCTGA TTACCAAATT CCGTCACCAC
GGCGATGTGC TGTTGACCTC TCCGTTGTTT TCCATTCTGC GTCAACGCTA TCCGGAGGCC
CGTATCGACG CGCTGGTGTT TGCGGAAACC GCAGAAATGC TGTCGTTGCA CCCGGCGATC
GACCAGCTCT ATACCGTAGA CAAGAAATGG AAAAAACTCG GGCCCTTCCG GCATATAGCC
AAAGAGTGGG AACTGCTGAA AACGCTACGC CAGCAGCGTT ACGACCTCAT CATTCACCTG
ACTGAAAGCA TGCGCGGCTT CTGGATAGCC CGGCTGGCCA GGATCCCGGC TGGCGTGACG
TTCCGCAACG CCGGGCGCGA TAAGCTCTCG TTCTGGCGCA ATACCTTCCA GTTTCGCGTC
CCGCGCATTT CACGCCGCCA TACCGTGGAA TCCCATCTGG ATACCCTGCG GGTATTGGGG
ATCCAACCGG AGATGGACGA ACGTCGTTTG CGGCTGGTGA GCGGCGAGAC GGCCGACCGT
TCGGTGGAAC GGAAACTGCG CGATCAGCAC TGGCAGGGGC AGCCGTTCAT CGTCGTGCAC
CCGACGTCAC GCTGGCTATT CAAGTGCTGG AAAAGCAGCG CCATGGCGGA AACCATCAAC
CATCTCTGCA GGCAGGGGCA CACCATTGTG CTTAGCGCTT CGCCTGCCGA CAGCGAGATG
GCGATGATCG CCGAAATTAA ATCGAGATTG GAATACCCGG TGCTGGATCT GGCGGGTCAG
CTATCGCTCA AAGAGCTGGC CGGCCTTATC GGCAAGGCCC AGTTGCTGCT GGGAGTTGAC
TCGGTGCCGA TGCATATCGC CTCGGCGATG CAAACACCGG TGGTTGCGTT GTTCGGCCCC
AGCGGCGAAA CCGAATGGTC GCCCTGGATG ACCGTCAACC GGGTGATTGT TTCCGAACGC
CATCACTGCC GCCCTTGCGG CAAGGACGGC TGCGGCGGCA GCAAGGTTAG TGACTGTCTG
CAACAGATCA GCGTGCAGCA AGTGCTGCTG GCTATCGACT CCGCATTGTT GGAGGCACAG
GCATGA
|
|---|
| Protein sequence | MTSPRNVEFR RILITKFRHH GDVLLTSPLF SILRQRYPEA RIDALVFAET AEMLSLHPAI
DQLYTVDKKW KKLGPFRHIA KEWELLKTLR QQRYDLIIHL TESMRGFWIA RLARIPAGVT
FRNAGRDKLS FWRNTFQFRV PRISRRHTVE SHLDTLRVLG IQPEMDERRL RLVSGETADR
SVERKLRDQH WQGQPFIVVH PTSRWLFKCW KSSAMAETIN HLCRQGHTIV LSASPADSEM
AMIAEIKSRL EYPVLDLAGQ LSLKELAGLI GKAQLLLGVD SVPMHIASAM QTPVVALFGP
SGETEWSPWM TVNRVIVSER HHCRPCGKDG CGGSKVSDCL QQISVQQVLL AIDSALLEAQ
A
|
|---|
| |