| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0145 |
|---|
| Symbol | |
|---|
| ID | 8087566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 164559 |
|---|
| End bp | 165479 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644834211 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002985786 |
|---|
| Protein GI | 242237605 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.022065 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGCCT ATATCGTCCG ACGTTTGCTG GAAATGATCC CGGTTCTGCT GGTGATCTCC
CTGTTGGTGT TCGGTTTTAT CAAGCTGTTG CCGGGCGACC CGGCACGGAT CTACGCCGGC
TCCGATGCCA CGATTGAAGC GGTGGAAGCC GCCCGCGAGC ATCTGGGCCT CAACAACCCG
CTGCCGCAGC AGTACCTCGA CTGGCTGAGC GGGATGATGC ACGGTGACTT CGGCATCACC
TACCGCACCC AGCAGCCGGT GTTAAAGGTT ATCCAGAAAA GTTTTATGCC GACGCTGTGG
CTGGCGTTGG CCGGTTTTAT CTGGTCGGTA GTGCTCGGCC TGCTGATCGG CGTATTCGCC
GCGCTCAAGC GCGGTAAATG GCAAGACTGG ACGCTGATGA GCGCCGCCGT CGGCGGCATT
TCGATGCCGA CCTTCTGGCT CGGCCTGTTG CTGATCCAGT TCGTCGCCAT GCCGTTCGGC
ATTTTTTCCG TCAGCGGTTT CAATAAACCG CTGGATATCG TGCTGCCGGC GCTGACGCTG
GGCGCGTCGG TCGCGGCGGT AATGGCGCGC TTCACCCGCT CCGCCTTTCT GGAAGTGATG
CAGGAAGACT ACGTGCGCAC CGCCCGCGCC AAAGGGCTGC GTCAGCGGTT GATCGTCTGG
AAGCATGTGA TGCGCAACGC GCTGATCCCG GTGATTACCA TGCTCGGCCT GCAATTCGGT
TTCCTGCTCG GCGGCTCGAT CGTGGTGGAA AGCGTGTTCA ACTGGCCGGG GCTCGGCTGG
TTGCTGATCG AATCCATCAA AACACAAGAC CAGCCGGTGA TTCAGGCGCT GGTCATGCTG
TTCGTCATTG AATTTATCCT GATTAACCTG CTGGTCGACC TGCTGTACGC GGTGGTGAAT
CCGGCCATTC GTTTACGTTA G
|
|---|
| Protein sequence | MFAYIVRRLL EMIPVLLVIS LLVFGFIKLL PGDPARIYAG SDATIEAVEA AREHLGLNNP
LPQQYLDWLS GMMHGDFGIT YRTQQPVLKV IQKSFMPTLW LALAGFIWSV VLGLLIGVFA
ALKRGKWQDW TLMSAAVGGI SMPTFWLGLL LIQFVAMPFG IFSVSGFNKP LDIVLPALTL
GASVAAVMAR FTRSAFLEVM QEDYVRTARA KGLRQRLIVW KHVMRNALIP VITMLGLQFG
FLLGGSIVVE SVFNWPGLGW LLIESIKTQD QPVIQALVML FVIEFILINL LVDLLYAVVN
PAIRLR
|
|---|
| |