| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0116 |
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| Symbol | araD |
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| ID | 8087537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | - |
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| Start bp | 134212 |
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| End bp | 134904 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644834182 |
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| Product | L-ribulose-5-phosphate 4-epimerase |
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| Protein accession | YP_002985757 |
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| Protein GI | 242237576 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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| TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00979239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTACCG CGCTGAAACA ACGGGTGCTG GAAGCCAACC TGCTGCTACC GCATTACGGA
CTGGTGACGT TTACCTGGGG CAACGTCTCG GAGATCGACC GCCAGCAAGG GGTTATCGCC
ATCAAACCCT CCGGCGTCAG TTACGACGCC ATGACGGTGG ACGACATCGT GGTGGTGGAT
CTGGACGGAC ATACGGTGGA AGGGGTGCTC AACCCCTCCA GCGACACCGC GACCCATCTG
GTGCTGTATC ACGCCTTCCC GGCGCTGGGC GGTATCGTCC ACACCCACTC CCGCAGCGGC
ACCGTCTGGG CGCAGGCGGG GATGGACATC CCGGCGCTCG GCACCACCCA CGCCGACTAC
TTTTACGGCG ACATTCCCTG CACCCGGCCG CTAACCCGCA CGGAGATCGA TACCGATTAC
GAAAAACATA CCGGCGACGT GATTGTGGAA ACCTTCCGCC AGCGCGATCT GGATCCGATG
GCGGTGCCCA GCGCGGTGAT CACCGGCCAT GCGCCTTTTT CTTGGGGGAA AGATGCGTTC
GATGCGGTGC ACAACGCCGT GGTGCTGGAG GAGGTGGCGG CGATGGCGCT CTCCACCCGC
ACGCTAAACC GCGAGATCCG CATTCAGCAG GCGCTGTCGG ACAAGCACTA CTTCCGTAAA
CACGGCGCCA ACGCCTACTA CGGGCAACAG TGA
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| Protein sequence | MFTALKQRVL EANLLLPHYG LVTFTWGNVS EIDRQQGVIA IKPSGVSYDA MTVDDIVVVD
LDGHTVEGVL NPSSDTATHL VLYHAFPALG GIVHTHSRSG TVWAQAGMDI PALGTTHADY
FYGDIPCTRP LTRTEIDTDY EKHTGDVIVE TFRQRDLDPM AVPSAVITGH APFSWGKDAF
DAVHNAVVLE EVAAMALSTR TLNREIRIQQ ALSDKHYFRK HGANAYYGQQ
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