Gene Dd703_0071 details

Gene Information

• Locus tag: Dd703_0071
• ID: 8087492
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: -
• Start bp: 84020
• End bp: 85912
• Gene Length: 1893 bp
• Protein Length: 630 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 644834137
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_002985712
• Protein GI: 242237531
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTATAA ATTTTGAGAA CATCAAGGTT AGCAAAAAGT TAGGGTTCGG TTTTGCACTG 
GTACTGTTGC TGACCGTTGT CATTGCAGGC GTCAGTGTGC GCTATATCGA AATACTGAAA 
GGGCGTTTTG AAAAAGTTAT TTTCAGTAAT CAAATCAGTG ATGAGGTTAA TCAGGCACGT 
TATTATCGTG CGCTTTATAG CGCCAATTAC AGTCCTGATA GCATGAAGGA AAACACCACA 
CATATTGATA ATGTTATTAA ATTAATATCG TCCATTCAGA CAAAATCCTG GCGGTCGGAT 
TATGACGGAA AATTGGGAAA TATCAGTAAA CTGATCGACC AATATAAAGA AAAACAGAAA 
AACTACCTTG ATGCCGTCGC TAAAAAAGAC GATGTCAGAA AGAGCTGGAA CCTGTCGGGT 
GCCGACAAGC CCGTCAAAGA ACTGGAACAA CAGATCAACG CATCGGGCGA TCTCTCCCAA 
CAACTGCAAC TGACAACACT AAATCAAAAA CTGGTTACTG TTCGCTATCT GGTGCGCGGC 
TTACTGTTGT CATTGAATAG TGACGCTGAA AAACCATTGC TGGCGGCACT GGATGACGCA 
CGCAGCAGCA CCGATCAGTT TGTGAAAATC CTGTCGCCGG AACAGCAGGC GATTCTCGCA 
CCGGTGGTAT CCACGTTATC AACGTACAAA ACACGGGTGC AGGCTTATCT TCCCGCTTAT 
CAGGAAGAGA TGAATCAAGG CAACCAACTT GGCGCCGTTG CGGAACAACT GATGTCAGAG 
GTGGATAAGC TCGTCACCGA AGAAACGACA TCCACCCAGC AGGATATCGC CAACGCTGAA 
TGGCAGATAG CCATCACGTC GATAATCACA CTACTGCTAG GCGTCCTGGT AGCTTGGTAT 
ATCTCCCGCC AGATAACTCA CCCGCTGAAC CAAACGGTCA ATATCGCCGA ACGTATCGCA 
ACAGGCGATC TGACCGTTAC GGTGGAAACC CAACGCCGCG ATGAGCTGGG TATGCTGCTC 
GGCGCTATGG CAAAAATGAA AGCCAATCTG CACAACATGA TCGACGATAT TCGTATGGGA 
GTGACCCAAA TCACTACCGC CGCCAGCGAA ATCGTCACCG GCAACAATGA CCTCGCCGCA 
CGAACGGAAG CGCAGGCCGC TGCGGTAGAA GAAACCGCCG CCAGCATGGA GCAACTGACC 
GCGACCGTGA AACAAAACGC CGACAACGCG CATCACGCCA ATAAACTGGT GCTGGATGCC 
ACGCAGACGG CGCAATCAGG CGGGAAACTG GTGGAAAACG TGGTGCAGAC CATGTCCGAA 
ATCGAAGGCA GCTCCAAACG CATTGCAGAA ATTACATCGG TGATAAACGG CATCGCGTTC 
CAGACCAACA TTCTGGCGCT CAACGCCGCC GTAGAAGCGG CGCGCGCCGG TGAACAGGGC 
CGTGGATTCG CCGTAGTCGC TAACGAAGTC CGCAATCTGG CGCAGCGCAG TTCGCAGGCG 
GCCAAAGAAA TTGAAGGGCT GATCTCTACG TCGGTGGAAC AGGTTTCCCA CGGTGCGCAA 
CTGGTGCACA AGGCAGGAAA AACCATGAAT GACATCGTTT CGGCGGTCAC GCATGTCCAC 
GACATCATGG GGGAAATCAC CATGGCCTCC GACGAACAGA GCCGTGGCAT CGCCCAGGTC 
AATCAGGCGA TAGTGGGCAT GGACAGTTCC ACGCAACAGA ACGCCGCACT GGTACAGGAA 
TCCTCGGCGG CGGCCAATTC ACTCGAAGAT CAGGCGGTGT TGCTGTCGAA TGCCGTTTCT 
GTATTCCGCC TCTCTTCGGG ACGGGAATTG GGGCCGGCAA CCCATGGCCT TCCGTTTGCC 
GGCAGCCCGC GGCAATTGCC CCTCCCGCGC TGA 

 

Protein sequence

MAINFENIKV SKKLGFGFAL VLLLTVVIAG VSVRYIEILK GRFEKVIFSN QISDEVNQAR 
YYRALYSANY SPDSMKENTT HIDNVIKLIS SIQTKSWRSD YDGKLGNISK LIDQYKEKQK 
NYLDAVAKKD DVRKSWNLSG ADKPVKELEQ QINASGDLSQ QLQLTTLNQK LVTVRYLVRG 
LLLSLNSDAE KPLLAALDDA RSSTDQFVKI LSPEQQAILA PVVSTLSTYK TRVQAYLPAY 
QEEMNQGNQL GAVAEQLMSE VDKLVTEETT STQQDIANAE WQIAITSIIT LLLGVLVAWY 
ISRQITHPLN QTVNIAERIA TGDLTVTVET QRRDELGMLL GAMAKMKANL HNMIDDIRMG 
VTQITTAASE IVTGNNDLAA RTEAQAAAVE ETAASMEQLT ATVKQNADNA HHANKLVLDA 
TQTAQSGGKL VENVVQTMSE IEGSSKRIAE ITSVINGIAF QTNILALNAA VEAARAGEQG 
RGFAVVANEV RNLAQRSSQA AKEIEGLIST SVEQVSHGAQ LVHKAGKTMN DIVSAVTHVH 
DIMGEITMAS DEQSRGIAQV NQAIVGMDSS TQQNAALVQE SSAAANSLED QAVLLSNAVS 
VFRLSSGREL GPATHGLPFA GSPRQLPLPR