Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_0050 |
Symbol | avtA |
ID | 8087471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 60637 |
End bp | 61890 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644834116 |
Product | valine--pyruvate transaminase |
Protein accession | YP_002985691 |
Protein GI | 242237510 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3977] Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTCT CCCGTTTCGG CAACAAATTT ACCCGCCATT CCGGCATCAC CCAGCTGATG GCGGATCTGA ACGACGGCCT GCGCACACCC GGCGCCATTA TGCTGGGCGG CGGCAACCCG GCCCATATTC CAGAGATGGA TATGTATTTT CAGCAGCTGT GCGGCGATTT GCTGGCAGAA GGAAAATTAA CGGAAGCGCT GTGCAATTAC GACGGCCCAC AGGGTAAAGA CGCGCTGTTG TCCGCGCTGG CGGAAATGCT GCATCAGCAG CAGGGGTGGG ATATCGGCCC GCAGAACATC GCGCTGACCA ATGGCAGCCA GAGCGCTTTT TTCTATCTGT GCAACCTGTT CGCCGGGCGT ACCGATGACG GCAAACTGCG CCGGGTGTTG TTCCCGCTGG CGCCGGAATA TATCGGTTAC GCCGATTCCG GGGTGGATGA AGACATGTTC GTCTCGCTGC GCCCGCAGAT TGAACTGCTG CCGGAAGGGC AATTCAAATA CCACGTTGAT TTTGAACAAC TGAACATTAC CGATGACATC GGCATGATCT GCGTCTCGCG TCCCACCAAT CCCACCGGCA ACGTGCTGAC CGACGACGAA GTGCAGCATC TGGATGCGCT GGCGCGCCAG CACCAGATCC CGCTGGTGAT CGACAACGCC TACGGCGTGC CGTTTCCCGG TATTATCTTC AGCGACGCCA CACCGTTGTG GAACCCCAAC ATCATTCTGT GCATGAGCCT GTCCAAACTG GGGTTGCCCG GCTCACGCTG CGGCATTGTG ATTGCCGCGG AACCGGTGAT CGCAGCGCTC GGCAACATGA ACGGCATCAT CAGCCTGGCG CCCGGCTCTA TCGGCCCGGC CATTGCCCTT GAGATGATCC GTCGCGGCGA TCTGCTACGC CTGTCGGAAC AGGTGGTGCG CCCGTTCTAC CGCCAGCGCG TCGCACAGAC TATCGCCATC ATCCGCCGCT ATCTGTCGCC GGAACGCTGT CTGATCCATA AACCCGAAGG CGCGATTTTC CTGTGGTTGT GGCTGCGCGA CCTGCCGATC ACCACCGAAG AGCTGTACCA GCGACTGAAA AAACGCGGCG TACTGATGGT GCCCGGCCAT TACTTTTTCC CCGGCCTGGC GCAGGAATGG GATCACGCCC ACCAGTGCCT GCGCATGAAC TATGTGCCGG AACCGGAAAA AATCGAACGG GGCGTCGGCA TTCTGGCGGA AGAAATCGAG CGAGCGTGGC AGGAAAAACG CTGA
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Protein sequence | MNFSRFGNKF TRHSGITQLM ADLNDGLRTP GAIMLGGGNP AHIPEMDMYF QQLCGDLLAE GKLTEALCNY DGPQGKDALL SALAEMLHQQ QGWDIGPQNI ALTNGSQSAF FYLCNLFAGR TDDGKLRRVL FPLAPEYIGY ADSGVDEDMF VSLRPQIELL PEGQFKYHVD FEQLNITDDI GMICVSRPTN PTGNVLTDDE VQHLDALARQ HQIPLVIDNA YGVPFPGIIF SDATPLWNPN IILCMSLSKL GLPGSRCGIV IAAEPVIAAL GNMNGIISLA PGSIGPAIAL EMIRRGDLLR LSEQVVRPFY RQRVAQTIAI IRRYLSPERC LIHKPEGAIF LWLWLRDLPI TTEELYQRLK KRGVLMVPGH YFFPGLAQEW DHAHQCLRMN YVPEPEKIER GVGILAEEIE RAWQEKR
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