| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0045 |
|---|
| Symbol | |
|---|
| ID | 8087466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 54470 |
|---|
| End bp | 55783 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644834111 |
|---|
| Product | dihydropyrimidine dehydrogenase |
|---|
| Protein accession | YP_002985686 |
|---|
| Protein GI | 242237505 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0167] Dihydroorotate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01037] dihydroorotate dehydrogenase (subfamily 1) family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATT TGAGCACCGA ATTTCTGGGT ATTAAGAGCC CTAACCCGTT CTGGCTGGCG
TCCGCGCCGC CGACGGACAA GGAATACAAC GTGGTGCGGG CGTTTGAAGC GGGCTGGGGC
GGCGTGGTTT GGAAAACGCT GGGGCTGGAT CCGCATGTGG TCAACGTCAG CGGCCCGCGC
TACAGCACGC TTCTGGGCGC CGATCGCCGG GTATTGGGGC TCAATAACAT CGAGCTGATT
ACCGACCGGC CGCTGCACGT CAATCTGGAA GAAATCGCCC GGGTTAAACG CAACTGGCCG
GATCGCGCCA TGATTGTGTC GATCATGGTG CCCTGCGAGG AAGAAGCGTG GAAAGCCATT
CTGCCGCTGG TGGAAGAGAC CGGCGCCGAC GGCATTGAGC TGAACTTCGG CTGTCCGCAC
GGTATGAGCG AGCGCGGCAT GGGGGCGGCG GTGGGGCAGG TGCCGGAATA CATCGAAAGA
GTGACCCGCT GGTGCAAGCA GTATTGCAGC CTGCCGGTGA TCGTCAAGCT GACGCCGAAC
ATCACCGACA TCCGTTATCC GGCGCGGGCG GCGAAACGCG GCGGCGCGGA CGCGGTATCG
CTGATCAACA CCATCAACTC GGTGATGGGG GTTGACCTTG ACCAGATGCT GATGACGCCG
CACACCGGCG GCAAAGGCTC CCACGGCGGT TACTGCGGCC CGGCGGTGAA ACCGATCGCG
CTCAATATGG TGTCGGAAAT CGCCCGCGAC CCGGACACGT TCGGCCTGCC GATTTCCGGT
ATCGGCGGCA TTTCCACCTG GCGCGACGCG GCGGAGTTCA TCGCGCTGGG TTGCGGCACG
GTACAGGTGT GCACCGCGGT GATGGTGCAG GGTTTCCCGA TTGTGCGCGA CATGATTAGC
GGGCTGTCCA ACTTTATGGA CGAACGCGGC TACCGCTCCA TCGAAGCGTT TCGCGGCCGT
GCGGTCAGTA GCGTCACCGA CTGGCGTTAC CTCAATCTGA ACCATATCGA CAAGGCGGTG
ATCGACCAGT CGCTGTGTAT CAAGTGCGGG CGTTGCCATT TGGCCTGCGA AGACACCTCC
CATCAGGCGA TCACCCGTCA GAAAAACGGT GAGCGTCATT TTGAAGTGAA AGAAGAGGAT
TGCGTCGGCT GCAACCTGTG CGTCTCCATC TGCCCGGTGG AAAACTGCAT CTCAATGCGC
AGCCTGCAAC CCGGCGAGGT GGATCTGCGT ACCGGCAAGA CGGTGAGCGC CGACTACGCC
AATTGGACTA CCCACCCGAA TAACCCGATG GCAACCACGG CAGGCGTGGC CTGA
|
|---|
| Protein sequence | MADLSTEFLG IKSPNPFWLA SAPPTDKEYN VVRAFEAGWG GVVWKTLGLD PHVVNVSGPR
YSTLLGADRR VLGLNNIELI TDRPLHVNLE EIARVKRNWP DRAMIVSIMV PCEEEAWKAI
LPLVEETGAD GIELNFGCPH GMSERGMGAA VGQVPEYIER VTRWCKQYCS LPVIVKLTPN
ITDIRYPARA AKRGGADAVS LINTINSVMG VDLDQMLMTP HTGGKGSHGG YCGPAVKPIA
LNMVSEIARD PDTFGLPISG IGGISTWRDA AEFIALGCGT VQVCTAVMVQ GFPIVRDMIS
GLSNFMDERG YRSIEAFRGR AVSSVTDWRY LNLNHIDKAV IDQSLCIKCG RCHLACEDTS
HQAITRQKNG ERHFEVKEED CVGCNLCVSI CPVENCISMR SLQPGEVDLR TGKTVSADYA
NWTTHPNNPM ATTAGVA
|
|---|
| |