| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0032 |
|---|
| Symbol | |
|---|
| ID | 8087453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 40345 |
|---|
| End bp | 41370 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644834098 |
|---|
| Product | putative cytoplasmic protein |
|---|
| Protein accession | YP_002985673 |
|---|
| Protein GI | 242237492 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3943] Virulence protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGATA ACATACCCCA ACCTCCTCAA GGCGAGTTGG TTCTTTTTAC CAGTGCTGAT
GGTAAAACCC GCGTCGAGTG TCGTTTTGAG TCAGACACCT TGTGGCTTTC TCAAGCCATG
ATCGGTGAGT TGTACGGCAA GGCGAAAGCA ACCATCAGTG AGCATATAAA AAATATCTTT
GCTGAAGGTG AATTGGACGA AAATTCAGTT GTTCGGTTAT ACCGAACAAC TGCGGGAGAT
GGAAAATCAT ACAATGTTCA ATACTTTAGC CTGAAATTAG TATTGGCGGT TGGTTATCGT
GTCCGTTCAA TACGTGGTAC TCAGTTCCGC CAATGGGCAA CTCAAACCTT ACAAGAGTAT
CTGATCAAAG GCTTCGTTAT GGATGATGAG CGCCTGAAAA ACCCACCCGT CGGCCACTCT
GCGGTGCCGG ATTACTTTGA TGAAATGCTG GAACGCATTC GCGATATCCG AGCCAGTGAG
CGACGTGTTT ATCTGCGGGT GAAAGAAATC TTTACCATGG CCGCGGATTA CGAGCCATCC
AATCAAGAGA CCAACCGCTT CTTTCAAACC ATCCAAAACA AGCTGCACTA TGCCTGCACG
CATATGACGG CCGCTGAGCT TATCGCCAAC CGTGTGGATG CCAGTAAGCC GGATATGGGT
CTGACCAGCT ACAAAGGCGA TGAGGTACGT AGGACTGACG TCACCGTTGC AAAGAACTAT
CTGCATGAAG ACGAAATCAA AGAGCTTAAT CGCATCGTCA ATATGTGGCT CGACTTTGCC
GAAGATCAGG CTCTGCGCCG CAAGCAGGTA TTCTTACAGG ACTGGGCAGA CAAGCTTGAC
CAGTTCTTAA GTTTTAACGA TCGGGATGTT TTAAGTGGTG CTGGGAAAAT ATCCAAACAA
GCGGCAGATG ATAAGGCCAA ACGGGAGTTT GACCGTTTTG CCCAGCAGCG CCGCCGCTTA
AAAGAAGCCG AAGGCGCACA AGCCAATATC GCTGCACTTA AGGCAATACT CAAAAAAGAC
AGATAG
|
|---|
| Protein sequence | MTDNIPQPPQ GELVLFTSAD GKTRVECRFE SDTLWLSQAM IGELYGKAKA TISEHIKNIF
AEGELDENSV VRLYRTTAGD GKSYNVQYFS LKLVLAVGYR VRSIRGTQFR QWATQTLQEY
LIKGFVMDDE RLKNPPVGHS AVPDYFDEML ERIRDIRASE RRVYLRVKEI FTMAADYEPS
NQETNRFFQT IQNKLHYACT HMTAAELIAN RVDASKPDMG LTSYKGDEVR RTDVTVAKNY
LHEDEIKELN RIVNMWLDFA EDQALRRKQV FLQDWADKLD QFLSFNDRDV LSGAGKISKQ
AADDKAKREF DRFAQQRRRL KEAEGAQANI AALKAILKKD R
|
|---|
| |