Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_0028 |
Symbol | |
ID | 8087449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 34700 |
End bp | 36340 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644834094 |
Product | ABC transporter related |
Protein accession | YP_002985669 |
Protein GI | 242237488 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0987785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCTGC TGGCAGGTTT GCAAACCCAG GCGCCGCAAC CGGTACTGGC GCTGGACGAC GTCACCATCG CCTATCGCGG CGACGACGGC GAACGCATCG TGGTGGAGGG CGTTTCGTTC TCCATCTGGC CCGGCGAAGT CGTCGCGCTG GTAGGGGAAT CCGGCTCCGG TAAAACCACC ACCGCCCAGT CCGTCATCGG GTTACTGGCG GATAACGGCC GCCTGGCGCG CGGCGCCATC CGCCTGAACG GCATCGACAT CAGCCGCTGG CCGCAAAAAC GGTTGGACAG TATTCGCGGC AGCGTCGTTA GCCTGGTGCC GCAGGATCCC GGCAGTTCCC TCAACCCGGT AAAAACCATC GGCGAACAGG TGGACGAAAT TTTGCGGCTG CATCAGAACC GCGGCGATCG CAAAGCCATC CGTCAGCAGA CGTTGGCGCT GCTGGCGCGC GTCGGGTTGA CGCAGCCGGA ATTGCGTGCC GCCCAGTATC CGCATGAGCT GTCCGGCGGC ATGAAACAGC GGGTGCTGAT TGCCATCGCC ATCGCGCTGA AACCGGCGCT GATCATCGCC GACGAACCCA CCAGCGCACT CGATGTGACG GTGCAAAAAC GCATTCTCGA CCTGTTGGAC GACCTGCGCC GGGAACAGGG CACCGCCGTG CTGTTCGTCA CCCACGATCT GGGGGTGGCG GCCGAGCGCG CCGATCGACT GCTGGTGTTT CGCCAGGGCT ATATTCAAGA ACAGGGGCCG GTGCGGGAGG TGTTGTCCGC GCCGCAAAGC CCGTACACCC GCACGCTGCT GGACAACATT CCCTCGCTGG CGGCGACCAA ACGCCCCAGC CGCCGGCAGG ACGGCGCCCC CATCGTCACC GTGGAGCATT TGGTGCAGGA ATTCCCGCTG GCGGGCAAAA CCACGCCGTT TCGCGCGGTG GACGATATCT CGTTCAGCGT CGCGCCGGGT ACCACCCACG CCATCGTCGG CGAATCCGGC TCCGGCAAAA CCACCACCGC CCGCCTGCTG CTCGGCTTCC AGCGTCCGAC CGCCGGCCGC ATTGTGATCG ACGGTACTGA CATCGCCCCG CTACGCGGTG AAGCGCTGCG TCAGTTTCGC CAGCACATCC AACTGGTGTA CCAAAACCCG TTCAGTTCGC TCGACCCGGC GCAACGGCTG GCGGATATCG TTGAAGAACC GCTGCGTAAT TTTGGCCGTT ACCGCCGTCT GGAGCGCCAG CAAAAAGTGG CGGAGATGTT CGAGCGGGTG GCATTGCCCG CCTCGCTGCT GCAACGCTAC CCGGCGGAGC TCTCCGGCGG CCAGCGTCAG CGCGTCGCTA TCGCCCGGGC ATTAGTGCTG GAGCCGAAGG TGCTGGTGCT GGACGAAGCG GTATCCGCGC TTGACGTCAC GGTGCAAGCG CAAATCCTGC GGCTGCTGGA AGAACTGCAA ACCGCGCTGG GACTGACTTA TCTGTTCATT TCGCACGATC TCGCCGTCGT CCGGCAAATC GCCGATACCG TGTCCGTACT CTGCCACGGC AAATTGGTGG AGTCCGGCCC GGTGGAACAG ATTTTCTCCC AGCCGGAGCA ACCCTATACC CAGGCGCTGA TCGACGCCAT TCCGGGGCGC CGCGCCCTGA TCCACGCCTG A
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Protein sequence | MSLLAGLQTQ APQPVLALDD VTIAYRGDDG ERIVVEGVSF SIWPGEVVAL VGESGSGKTT TAQSVIGLLA DNGRLARGAI RLNGIDISRW PQKRLDSIRG SVVSLVPQDP GSSLNPVKTI GEQVDEILRL HQNRGDRKAI RQQTLALLAR VGLTQPELRA AQYPHELSGG MKQRVLIAIA IALKPALIIA DEPTSALDVT VQKRILDLLD DLRREQGTAV LFVTHDLGVA AERADRLLVF RQGYIQEQGP VREVLSAPQS PYTRTLLDNI PSLAATKRPS RRQDGAPIVT VEHLVQEFPL AGKTTPFRAV DDISFSVAPG TTHAIVGESG SGKTTTARLL LGFQRPTAGR IVIDGTDIAP LRGEALRQFR QHIQLVYQNP FSSLDPAQRL ADIVEEPLRN FGRYRRLERQ QKVAEMFERV ALPASLLQRY PAELSGGQRQ RVAIARALVL EPKVLVLDEA VSALDVTVQA QILRLLEELQ TALGLTYLFI SHDLAVVRQI ADTVSVLCHG KLVESGPVEQ IFSQPEQPYT QALIDAIPGR RALIHA
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