Gene Dd703_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0028 
Symbol 
ID8087449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp34700 
End bp36340 
Gene Length1641 bp 
Protein Length546 aa 
Translation table11 
GC content64% 
IMG OID644834094 
ProductABC transporter related 
Protein accessionYP_002985669 
Protein GI242237488 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0987785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCTGC TGGCAGGTTT GCAAACCCAG GCGCCGCAAC CGGTACTGGC GCTGGACGAC 
GTCACCATCG CCTATCGCGG CGACGACGGC GAACGCATCG TGGTGGAGGG CGTTTCGTTC
TCCATCTGGC CCGGCGAAGT CGTCGCGCTG GTAGGGGAAT CCGGCTCCGG TAAAACCACC
ACCGCCCAGT CCGTCATCGG GTTACTGGCG GATAACGGCC GCCTGGCGCG CGGCGCCATC
CGCCTGAACG GCATCGACAT CAGCCGCTGG CCGCAAAAAC GGTTGGACAG TATTCGCGGC
AGCGTCGTTA GCCTGGTGCC GCAGGATCCC GGCAGTTCCC TCAACCCGGT AAAAACCATC
GGCGAACAGG TGGACGAAAT TTTGCGGCTG CATCAGAACC GCGGCGATCG CAAAGCCATC
CGTCAGCAGA CGTTGGCGCT GCTGGCGCGC GTCGGGTTGA CGCAGCCGGA ATTGCGTGCC
GCCCAGTATC CGCATGAGCT GTCCGGCGGC ATGAAACAGC GGGTGCTGAT TGCCATCGCC
ATCGCGCTGA AACCGGCGCT GATCATCGCC GACGAACCCA CCAGCGCACT CGATGTGACG
GTGCAAAAAC GCATTCTCGA CCTGTTGGAC GACCTGCGCC GGGAACAGGG CACCGCCGTG
CTGTTCGTCA CCCACGATCT GGGGGTGGCG GCCGAGCGCG CCGATCGACT GCTGGTGTTT
CGCCAGGGCT ATATTCAAGA ACAGGGGCCG GTGCGGGAGG TGTTGTCCGC GCCGCAAAGC
CCGTACACCC GCACGCTGCT GGACAACATT CCCTCGCTGG CGGCGACCAA ACGCCCCAGC
CGCCGGCAGG ACGGCGCCCC CATCGTCACC GTGGAGCATT TGGTGCAGGA ATTCCCGCTG
GCGGGCAAAA CCACGCCGTT TCGCGCGGTG GACGATATCT CGTTCAGCGT CGCGCCGGGT
ACCACCCACG CCATCGTCGG CGAATCCGGC TCCGGCAAAA CCACCACCGC CCGCCTGCTG
CTCGGCTTCC AGCGTCCGAC CGCCGGCCGC ATTGTGATCG ACGGTACTGA CATCGCCCCG
CTACGCGGTG AAGCGCTGCG TCAGTTTCGC CAGCACATCC AACTGGTGTA CCAAAACCCG
TTCAGTTCGC TCGACCCGGC GCAACGGCTG GCGGATATCG TTGAAGAACC GCTGCGTAAT
TTTGGCCGTT ACCGCCGTCT GGAGCGCCAG CAAAAAGTGG CGGAGATGTT CGAGCGGGTG
GCATTGCCCG CCTCGCTGCT GCAACGCTAC CCGGCGGAGC TCTCCGGCGG CCAGCGTCAG
CGCGTCGCTA TCGCCCGGGC ATTAGTGCTG GAGCCGAAGG TGCTGGTGCT GGACGAAGCG
GTATCCGCGC TTGACGTCAC GGTGCAAGCG CAAATCCTGC GGCTGCTGGA AGAACTGCAA
ACCGCGCTGG GACTGACTTA TCTGTTCATT TCGCACGATC TCGCCGTCGT CCGGCAAATC
GCCGATACCG TGTCCGTACT CTGCCACGGC AAATTGGTGG AGTCCGGCCC GGTGGAACAG
ATTTTCTCCC AGCCGGAGCA ACCCTATACC CAGGCGCTGA TCGACGCCAT TCCGGGGCGC
CGCGCCCTGA TCCACGCCTG A
 
Protein sequence
MSLLAGLQTQ APQPVLALDD VTIAYRGDDG ERIVVEGVSF SIWPGEVVAL VGESGSGKTT 
TAQSVIGLLA DNGRLARGAI RLNGIDISRW PQKRLDSIRG SVVSLVPQDP GSSLNPVKTI
GEQVDEILRL HQNRGDRKAI RQQTLALLAR VGLTQPELRA AQYPHELSGG MKQRVLIAIA
IALKPALIIA DEPTSALDVT VQKRILDLLD DLRREQGTAV LFVTHDLGVA AERADRLLVF
RQGYIQEQGP VREVLSAPQS PYTRTLLDNI PSLAATKRPS RRQDGAPIVT VEHLVQEFPL
AGKTTPFRAV DDISFSVAPG TTHAIVGESG SGKTTTARLL LGFQRPTAGR IVIDGTDIAP
LRGEALRQFR QHIQLVYQNP FSSLDPAQRL ADIVEEPLRN FGRYRRLERQ QKVAEMFERV
ALPASLLQRY PAELSGGQRQ RVAIARALVL EPKVLVLDEA VSALDVTVQA QILRLLEELQ
TALGLTYLFI SHDLAVVRQI ADTVSVLCHG KLVESGPVEQ IFSQPEQPYT QALIDAIPGR
RALIHA