Gene Dd703_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0005 
Symbol 
ID8087426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp6528 
End bp7712 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content61% 
IMG OID644834071 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002985646 
Protein GI242237465 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.32076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATGA AAAAGCTACC ATTGCTGGCA CAGGTTTCCT CCGCCCACTG GGTGAGTCAT 
TTCCACATGA TGGTATTGCC GGCGCTGATG CCGCTAATCT CAGCACAGCG CGGCATCAGT
TATGTGGAAA TCGGCGTCGC GCTGGGCGTG TTCAATGTGG TTTCAGCACT GGTGCAAACG
CCGATCGGCT TCGCCGTCGA TCGCATCGGC CCACGCCGCA CGCTGATCGC CGGTCTGACG
CTGGGCAGCT TGTGCTTTCT GTCGCTTAGC CTGTTTACCA GTTATGCCTG GATGATTATC
GCCATGGCGC TGGCCGGGCT GGCCAACGCG GTTTATCACC CGTCGGATTA CGCCCTGTTG
TCGCGCGGAA TTGCGGAAAA TCGCATGGGC CGCGCCTTTT CGATTCACAC CTTTTCCGGT
TTTCTCGGTA CCGCGGTAGC CCCGGCTATT CTGCTGTCGG TGGCGTCCAT CGCCCACATT
GCATTCGCGT TTGCGCTGGC CGGCGTCGTG GGGCTGCTGA CAGTTCCCCT GTTGCTGAGC
GAGCGCGAAG CGCCGGTCGC GGCCGCCAGC CGCAAAAACG CCGCAGCATC CCGCGCCGGT
GTCTTCACGC TGCCTGTGTT GGTACTGCTG ATCCTGTTTA TGCTGCTCAA CCTCAGCACC
AACTCGATCC AGAACTTCTC CGTTACCGCG CTGGTGAACG GCTACGGCAT GCCGCTAACG
CAAGCCAATA TGGCGTTGAC CGCCTTCCTG TTTACCAGCG CCTTCGGCGT GTTGGCAGGC
GGTTCGCTGG CGGACAAAAC CCGGCATCAC GGACTGGTGG CCACCGGCTC GTTGCTTATT
ACCGCGGTAC TGATCGCCGT CGTGGCGGTC TACCCGCTGC CGTCGCCGGC AACCATCCTG
ATTTTGGGCG TAGCGGGTTT CCTCTCCGGC ATCATCGCGC CATCGCGGGA TATGCTGGTA
CGTGCGGTAT CGCCAGCCGG CGCGGAAGGC CGGGTGTTCG GCATCGTCAC CACCGGTTTT
AATATTGGTG GCGCTGCCGG CCCAGTAGCC TTCGGCTGGT TGCTGGATCA AGGTCATCCG
TCCGCTATTT TCTGGGCGGC GGTGATGTTT ATGGTGATTA CTGCCGCGAT GGCGCTGGAT
CAGGAACTGC GCAGCGCCAA ACGCCGGGCG CTGGCAACAG AGTAA
 
Protein sequence
MKMKKLPLLA QVSSAHWVSH FHMMVLPALM PLISAQRGIS YVEIGVALGV FNVVSALVQT 
PIGFAVDRIG PRRTLIAGLT LGSLCFLSLS LFTSYAWMII AMALAGLANA VYHPSDYALL
SRGIAENRMG RAFSIHTFSG FLGTAVAPAI LLSVASIAHI AFAFALAGVV GLLTVPLLLS
EREAPVAAAS RKNAAASRAG VFTLPVLVLL ILFMLLNLST NSIQNFSVTA LVNGYGMPLT
QANMALTAFL FTSAFGVLAG GSLADKTRHH GLVATGSLLI TAVLIAVVAV YPLPSPATIL
ILGVAGFLSG IIAPSRDMLV RAVSPAGAEG RVFGIVTTGF NIGGAAGPVA FGWLLDQGHP
SAIFWAAVMF MVITAAMALD QELRSAKRRA LATE