Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_0005 |
Symbol | |
ID | 8087426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 6528 |
End bp | 7712 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644834071 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002985646 |
Protein GI | 242237465 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.32076 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATGA AAAAGCTACC ATTGCTGGCA CAGGTTTCCT CCGCCCACTG GGTGAGTCAT TTCCACATGA TGGTATTGCC GGCGCTGATG CCGCTAATCT CAGCACAGCG CGGCATCAGT TATGTGGAAA TCGGCGTCGC GCTGGGCGTG TTCAATGTGG TTTCAGCACT GGTGCAAACG CCGATCGGCT TCGCCGTCGA TCGCATCGGC CCACGCCGCA CGCTGATCGC CGGTCTGACG CTGGGCAGCT TGTGCTTTCT GTCGCTTAGC CTGTTTACCA GTTATGCCTG GATGATTATC GCCATGGCGC TGGCCGGGCT GGCCAACGCG GTTTATCACC CGTCGGATTA CGCCCTGTTG TCGCGCGGAA TTGCGGAAAA TCGCATGGGC CGCGCCTTTT CGATTCACAC CTTTTCCGGT TTTCTCGGTA CCGCGGTAGC CCCGGCTATT CTGCTGTCGG TGGCGTCCAT CGCCCACATT GCATTCGCGT TTGCGCTGGC CGGCGTCGTG GGGCTGCTGA CAGTTCCCCT GTTGCTGAGC GAGCGCGAAG CGCCGGTCGC GGCCGCCAGC CGCAAAAACG CCGCAGCATC CCGCGCCGGT GTCTTCACGC TGCCTGTGTT GGTACTGCTG ATCCTGTTTA TGCTGCTCAA CCTCAGCACC AACTCGATCC AGAACTTCTC CGTTACCGCG CTGGTGAACG GCTACGGCAT GCCGCTAACG CAAGCCAATA TGGCGTTGAC CGCCTTCCTG TTTACCAGCG CCTTCGGCGT GTTGGCAGGC GGTTCGCTGG CGGACAAAAC CCGGCATCAC GGACTGGTGG CCACCGGCTC GTTGCTTATT ACCGCGGTAC TGATCGCCGT CGTGGCGGTC TACCCGCTGC CGTCGCCGGC AACCATCCTG ATTTTGGGCG TAGCGGGTTT CCTCTCCGGC ATCATCGCGC CATCGCGGGA TATGCTGGTA CGTGCGGTAT CGCCAGCCGG CGCGGAAGGC CGGGTGTTCG GCATCGTCAC CACCGGTTTT AATATTGGTG GCGCTGCCGG CCCAGTAGCC TTCGGCTGGT TGCTGGATCA AGGTCATCCG TCCGCTATTT TCTGGGCGGC GGTGATGTTT ATGGTGATTA CTGCCGCGAT GGCGCTGGAT CAGGAACTGC GCAGCGCCAA ACGCCGGGCG CTGGCAACAG AGTAA
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Protein sequence | MKMKKLPLLA QVSSAHWVSH FHMMVLPALM PLISAQRGIS YVEIGVALGV FNVVSALVQT PIGFAVDRIG PRRTLIAGLT LGSLCFLSLS LFTSYAWMII AMALAGLANA VYHPSDYALL SRGIAENRMG RAFSIHTFSG FLGTAVAPAI LLSVASIAHI AFAFALAGVV GLLTVPLLLS EREAPVAAAS RKNAAASRAG VFTLPVLVLL ILFMLLNLST NSIQNFSVTA LVNGYGMPLT QANMALTAFL FTSAFGVLAG GSLADKTRHH GLVATGSLLI TAVLIAVVAV YPLPSPATIL ILGVAGFLSG IIAPSRDMLV RAVSPAGAEG RVFGIVTTGF NIGGAAGPVA FGWLLDQGHP SAIFWAAVMF MVITAAMALD QELRSAKRRA LATE
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