| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0004 |
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| Symbol | gyrB |
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| ID | 8087425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 3903 |
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| End bp | 6314 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644834070 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_002985645 |
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| Protein GI | 242237464 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.428577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAATT CTTATGACTC CTCAAGTATC AAGGTATTAA AAGGACTGGA TGCAGTCCGT
AAACGCCCGG GGATGTATAT CGGTGATACG GATGACGGAA CGGGTCTGCA TCATATGGTA
TTCGAGGTGG TGGACAACGC TATCGACGAA GCGCTCGCAG GCTACTGTAA AGATATTGTC
GTTACTATTC ATGCCGATAA CTCGGTGTCG GTGCAGGATG ACGGCCGTGG TATTCCCACC
GGCATTCACG AAGAAGAGGG CGTGTCCGCC GCCGAAGTCA TCATGACCGT GCTGCATGCG
GGCGGTAAAT TCGACGATAA CTCCTATAAA GTTTCCGGCG GTCTGCACGG CGTAGGGGTG
TCGGTGGTGA ACGCCCTGTC CGAAAAACTG GAGCTGGTGA TCCGCCGCGA AGGTAAACTT
CATCGTCAGG AATACAAACA CGGCGAGCCG CAGGCGCCGC TGGCCGTCGT CGGCGACGCC
AGTACCACCG GCACCACGGT GCGCTTCTGG CCGAGCCTGG AAACCTTCAC CAACGTGGTC
GAGTTTGAAT ATGACATTCT GGCCAAGCGT CTGCGTGAAC TGTCGTTCCT CAACTCCGGC
GTCTCCATTC GTTTGCGTGA CGAGCGTGAA GAGAACAAGG CCGACCACTT CCATTACGAA
GGCGGCATTA AGGCGTTCGT GGACTATCTG AACCGCAATA AAACGCCGAT TCACCCGCAA
GTGTTCTACT TCAGTGCCGA AAAAGACGGT ATCGGCGTGG AAGTCGCCAT GCAGTGGAAC
GACGGTTTCC AGGAAAACAT CTACTGCTTC ACCAACAATA TTCCACAGCG TGACGGCGGT
ACTCATCTGG CCGGTTTCCG CGCCGCCATG ACCCGCACGC TGAATAACTA CATGGAAAAG
GAAGGCTACA GCAAAAAAGC CAAGGTCAGC GCCACCGGCG ATGATGCGCG TGAAGGGCTG
ATTGCCGTGG TGTCGGTGAA AGTGCCGGAT CCGAAATTCT CTTCTCAGAC CAAAGACAAA
CTGGTGTCGT CCGAAGTGAA ATCGGCGGTG GAATCGCTGA TGAACGATCG GCTGGTGGAT
TACCTGATGG AAAACCCCAG CGACGCCAAA ATTGTGGTCG GCAAAATCAT CGATGCCGCC
CGCGCCCGCG AAGCGGCGCG CAAAGCGCGT GAAATGACGC GCCGCAAAGG CGCGCTGGAC
TTGGCGGGCT TGCCGGGCAA ACTGGCGGAT TGCCAGGAGC GCGACCCGGC GCTGTCCGAA
CTCTACCTGG TGGAAGGGGA CTCCGCAGGC GGCTCTGCCA AACAGGGGCG TAACCGTAAG
AATCAGGCCA TTCTGCCGTT GAAAGGGAAA ATCCTGAACG TGGAGAAAGC GCGTTTCGAC
AAGATGCTCT CCTCGCAGGA AGTGGCGACG CTGATCACTG CGCTGGGCTG CGGTATCGGC
CGGGACGAGT ACAACCCGGA TAAATTGCGG TATCACAGCA TCATCATCAT GACCGATGCC
GACGTCGACG GTTCCCACAT CCGCACGCTG TTGCTGACGT TCTTCTATCG CCAGATGCCG
GAAATCGTCG AGCGCGGGCA TGTTTTTATC GCGCAGCCGC CGTTGTACAA GGTGAAAAAG
GGCAAGCAGG AGCAGTACAT CAAAGATGAC GAGGCGATGG ATCAGTACCA GATCATGCTG
GCGCTGGACG GCGCGACGCT GCATACCAAC GCCCATGCCC CCGCGTTGGC CGGCGAGCCG
TTGGAGAAAC TGGTGGCCGA GCACTCGGGC GTACAGAAAC TGATTGATCG CCTGGAGCGT
CGTTATCCGA AAGCGTTGCT GAACGCATTG GTTTACCAAC CGGCGTTGAC GGAAGCGTTG
CTGAAGGACA GGGCGCAGGT GCAGCAGTGG ATCGAGACGC TGGTCAATCA TCTGCATGAG
CAGGAACAGC ACGGCAGCGC TTACAGTTTC GTCATCCGCG ATCTGCCGGA GCGTCATGAG
CCGGTGCTGC GTGTGCGTAC CCATGGCGTG GATTCTGATT ATGCGTTGGA TCTGGCGTTT
GTGCAGGGCA ATGAATATCG CAGAATCAAT CAGTTGGGTG AAAAACTACG TGGTTTGATC
GAAGACGGTG CTTTCATTGA ACGCGGCGAG CGCAAACAGC CGGTGGCCAG TTTCGAACAG
GCGCTGGAAT GGCTGACCAA AGAGTCACGC CGCGGTCTGG CGATCCAGCG TTACAAAGGG
TTGGGTGAAA TGAACCCGGA ACAGCTGTGG GAAACCACCA TGGATCCGGA AAGCCGCCGC
ATGTTGCGGG TGACGGTGAA AGACGCCATG GCCGCTGACG AGCTGTTCAC CACGCTGATG
GGCGACGCCG TCGAACCGCG CCGCGCCTTT ATTGAGGAAA ACGCCCTGAA AGCGGCGAAT
ATTGATATTT GA
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| Protein sequence | MSNSYDSSSI KVLKGLDAVR KRPGMYIGDT DDGTGLHHMV FEVVDNAIDE ALAGYCKDIV
VTIHADNSVS VQDDGRGIPT GIHEEEGVSA AEVIMTVLHA GGKFDDNSYK VSGGLHGVGV
SVVNALSEKL ELVIRREGKL HRQEYKHGEP QAPLAVVGDA STTGTTVRFW PSLETFTNVV
EFEYDILAKR LRELSFLNSG VSIRLRDERE ENKADHFHYE GGIKAFVDYL NRNKTPIHPQ
VFYFSAEKDG IGVEVAMQWN DGFQENIYCF TNNIPQRDGG THLAGFRAAM TRTLNNYMEK
EGYSKKAKVS ATGDDAREGL IAVVSVKVPD PKFSSQTKDK LVSSEVKSAV ESLMNDRLVD
YLMENPSDAK IVVGKIIDAA RAREAARKAR EMTRRKGALD LAGLPGKLAD CQERDPALSE
LYLVEGDSAG GSAKQGRNRK NQAILPLKGK ILNVEKARFD KMLSSQEVAT LITALGCGIG
RDEYNPDKLR YHSIIIMTDA DVDGSHIRTL LLTFFYRQMP EIVERGHVFI AQPPLYKVKK
GKQEQYIKDD EAMDQYQIML ALDGATLHTN AHAPALAGEP LEKLVAEHSG VQKLIDRLER
RYPKALLNAL VYQPALTEAL LKDRAQVQQW IETLVNHLHE QEQHGSAYSF VIRDLPERHE
PVLRVRTHGV DSDYALDLAF VQGNEYRRIN QLGEKLRGLI EDGAFIERGE RKQPVASFEQ
ALEWLTKESR RGLAIQRYKG LGEMNPEQLW ETTMDPESRR MLRVTVKDAM AADELFTTLM
GDAVEPRRAF IEENALKAAN IDI
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