| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_7220 |
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| Symbol | |
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| ID | 8022926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012858 |
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| Strand | - |
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| Start bp | 645295 |
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| End bp | 647193 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644834052 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_002985186 |
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| Protein GI | 241667102 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.177916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.420932 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTTGA AGATTTCCTA TGAGGACGGC AGCGGTCGAG AGGTCATCCC GCTCTCGGCG
AACGAAACCT ATTTCGTCGG CGAGAGCAGC ACGCTGACGC TGCCCGCCGG CGCGGGGGTC
GTGCGGTTGC GTGGCAGCCA CGTCTCTTCG CCGCAATTCG TGCTGCGGAA GTCCGGCCAG
GGATGGTCGG TGCAGCATCA CGGACGCAAC CCGACGCGGG TCGACGATCA GCCGCTTCGG
GCCGGCACCC CGGTTGCAGT CTCGGCCGGC ATGTCGATCT GGGTGCCGAA TGTCACGATC
GAGCTCGTCG AGCCGGCCGC GGCCGCCGAG GTGGTGACGC AATTTCCCGA TCAGGAACGC
GTGCTCGCCC TGCAGATGGA AATCCACGAA CGTCTGCTGA AGGACACGCA ATATGACCGG
CTCGTCAAAT CCGCCGATTT CGGCCGCGAG GACACGCGAA ACCGCATCCG CGAACGCCTC
GACATGTTCA TCAAGGAGGC GCTCGACGCA GCACAGCAGG ATCTCGTCAT CCTTGTCATC
AAGAACGCCG TCTATCGGTG GCTGGCCAAA CGCATTGCCC GAACGGGGCG GCGCGACGCA
TCGTCGAATG CCGCAAGCCT GTCGCGCGAG GAGCAGGACA ATCGCCGCCT CTTCGACGTC
GGCAAGGCGC TGATTTCGGC GCTGCAGCTC AAGCTCAACT TCGAATCCAC CCGCGCGGAC
TTTGCCCAGC TCGACACCCG TTTCAGCGCA GCTTTCCAGT CCAGGCAAGC GCTTTTTAAC
GCCGGTGACC GCTATGAGAT CGCCCATATG CACCTGCGCT CCAGCATCGA GGAGCTGATG
TATCGCTGGG GAACGATCTC CGAGCTGATG GATCTCGACG TGATCTCGGA AATCATGGTG
ACGCGCTACG ACGAGATCTA CGTCGAAAAA TTCGGCCTGC TGGAGCGCTA TCCCTTCGCC
TTCGCCAATG AGCGGCAGCT GATGAAGGTG ATCGAGCGCA TCGCCGTCGA TTCCAACCGC
TCGATCAACG AGAGCGAGGC GATGGCCGAC TTCCGCATGC CGGATGGCTC TCGCGTCAAC
GCCGTCATTC CGCCGCTGGC GGTCAAGGGC GCCTGCCTCA CCATCCGCAA GTTCGGCGGC
AAGTCGCGGC TCGATATCAG CAAACTGGTG ACCGCCGGCG CGCTCAGCGA GCCGATGCGC
GCCTTCCTCG AGGCGGCCGT CCGCTCCCGC AAGAACATCG TCGTCTCAGG CGGCACCGGC
TCCGGCAAGA CGACGCTCTT GAACAGCCTG TCGCAGTTCA TTCCGGTGGG CGAGCGCGTC
GTTGCCGTCG AAGACACGTC GGAACTGCAG CTCGACGGCA TTCATGTCGT CTATCTTCAA
TCGCGGCCGA AGACGGCGGA GTCGGAGACC AGCGTCACCA TCCGCGACCT CGTGCGCAAC
GCGCTGCGCA TGCGTCCCGA CCGCATCATC GTCGGCGAGT GCCGCGGCGC CGAGGCGATC
GACATGCTGC AGGCGATGAA CACCGGCCAT GCCGGCTCGA TGACGACGGC GCATGCCAAT
ACGCCGCAGG ACATGATGAC CCGCCTGGAG GTGATGGTGC TGCAGGGGCA GAGCTCGCTG
CCTGTCATGG CGATCCGCCA GCAGATCGTT GCCGCGGTCG AACTTGTCGT GCAGCTGAAC
CGCCTGGCAA ACGGTCGGCG CGCCGTCACC GAAATATCGG AGGTGATCGG TATCGATCCG
GATACCGGCC TCATCATCGT CGAGCCGATC TTCAATCTCG TCGGCCGTGC CGGCGGCCAG
GCCGTGCATG CCTTCACCGG CTACCTGCCG AGCTTCGTCG CCGAGCTCGT CGAGTTCAAC
GACGACGGCG AGATCGAAAA ACTGGACATG TTCGTCTAG
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| Protein sequence | MLLKISYEDG SGREVIPLSA NETYFVGESS TLTLPAGAGV VRLRGSHVSS PQFVLRKSGQ
GWSVQHHGRN PTRVDDQPLR AGTPVAVSAG MSIWVPNVTI ELVEPAAAAE VVTQFPDQER
VLALQMEIHE RLLKDTQYDR LVKSADFGRE DTRNRIRERL DMFIKEALDA AQQDLVILVI
KNAVYRWLAK RIARTGRRDA SSNAASLSRE EQDNRRLFDV GKALISALQL KLNFESTRAD
FAQLDTRFSA AFQSRQALFN AGDRYEIAHM HLRSSIEELM YRWGTISELM DLDVISEIMV
TRYDEIYVEK FGLLERYPFA FANERQLMKV IERIAVDSNR SINESEAMAD FRMPDGSRVN
AVIPPLAVKG ACLTIRKFGG KSRLDISKLV TAGALSEPMR AFLEAAVRSR KNIVVSGGTG
SGKTTLLNSL SQFIPVGERV VAVEDTSELQ LDGIHVVYLQ SRPKTAESET SVTIRDLVRN
ALRMRPDRII VGECRGAEAI DMLQAMNTGH AGSMTTAHAN TPQDMMTRLE VMVLQGQSSL
PVMAIRQQIV AAVELVVQLN RLANGRRAVT EISEVIGIDP DTGLIIVEPI FNLVGRAGGQ
AVHAFTGYLP SFVAELVEFN DDGEIEKLDM FV
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