| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6678 |
|---|
| Symbol | |
|---|
| ID | 8022588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012858 |
|---|
| Strand | + |
|---|
| Start bp | 108996 |
|---|
| End bp | 110684 |
|---|
| Gene Length | 1689 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644833545 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002984679 |
|---|
| Protein GI | 241666595 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
|---|
| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.736042 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGAAG CCATGCCCGC CGCGGCACCG GTGCTCAGCC TTCGCAAGCT GAGCGTCGAT
GCCCGCACCC CCGAAGGCCG GAAGCCCGTT CTCCAGGATG TCAGCTTCGA GCTTGCAGGC
GGCGAAACGC TCTGCATCGC CGGCGAATCC GGCTCCGGCA AGTCGGTCAC CTCGCTGTCG
ATCATGGGGC TCTTGCCGAA AGCCTCGCTG CGGGTCGCCT CCGGCAGCGT GCTGCTTGGC
GAGCGCGACC TGCTTAAGCT TTCCGACCGG GGGATGCGCA GCGTGCGCGG CGGCGATATC
GCCATGGTGT TCCAGGAGCC GATGACCTCG CTCAACCCGG TCATGTCGGT CGGCAACCAG
CTGACCGAAG CAATCCGCGC GCACCAGGGC AGCGAGAATG CCGAGGCGGT GGCGCTGAAG
ATGCTCGACG CCGTGCAGAT CACCGACCCG GCCCGGCGGC TGAAGCAATA TCCGCATGAG
CTTTCCGGCG GCATGAGGCA ACGGGTGATG ATCGCCATGG CGCTCTCCTG CCGGCCGAAG
GTGCTGATCG CCGACGAACC GACGACCGCA CTCGACGTCA CCGTACAGGC GCAGATCCTC
AGGCTGATGC GCGAGTTGAA GCGCGAATTC GGCGCCTCGA TCATCCTCAT CACCCACGAC
ATGGGCGTCG TCGCCGAAAT GGCCGACCGC GTCGTCATCA TGCAGAACGG CAGGATCGTC
GAGCAGGGAA CGACGCTCGC CATCTTCCAG CGGCCGAAGG AGGCCTATAC GCAGCAACTG
CTGGCCGCCG TCCCGCGGCT CGGCGCGTTT GCAGGCACCG ACCGTCCACC GCGCATCACA
CAGCGCGCCG TCGAGACGCT GCATCCGGAC CGCACGCCGG TCCTGAACGT GCGCGACCTC
ACCGTCACCT ACGGCAATGC CGCAAGCCGG TTTTTCAAGG GCAAGCCGCC GGTCGCAGCC
GTCGACGACG TTTCCTTCGA TATCCTGCCG GGTGAAACGC TCGGCCTTGT CGGCGAAAGC
GGTTCCGGCA AATCGACGAC CGGCAAGGCC GTGCTCGGTC TCATCCCCTT CAAGGGCAAC
GTCCTGATCG ACGGCCGCAA TATTGCCGGC CTCAGCCAGC GCGAGATGCG GCCCGTGCGC
CGCTCGGCGC AGATGATCTT CCAGGATCCC TATGCCTCGC TCGACCCGCG CATGGCTGTC
GGTAAGGCGA TCGGCGAACC GATGGTCATC CACGGCATCG GCAACCACAG TGAACGGCAG
GACCGCGTCG CCGAACTGCT GCGCCGGGTC GGCCTGACGC CTGATGCGGC GACGCGCTAT
CCACACGAAT TTTCAGGCGG CCAGCGCCAG CGCATCTGTA TTGCCCGGGC CCTGGCACTG
GAGCCGAAGC TGATCGTCGC CGACGAGAGC GTCGCAGCGC TTGACGTCTC GGTCCGCGCC
CGGGTGCTCG ACCTGCTGCT CGAACTGCAG GAGACGATGG GGCTCGCCTA TCTCTTCATC
TCCCACGACA TGGCGGTGGT CGAGCGCATG TCGCACAACG TCGCCGTCAT GCGCGCCGGC
CGCATCATCG AAACCGGCAC ACGGCGGGAT ATCTTCGAAA ACCCGAGAGA TGACTACACC
CGCGCGCTGA TCGCCGCGGT TCCGATCCCC GATCCGGAGG TCTATCGCGG CAAGGAAGCG
CATGCGTGA
|
|---|
| Protein sequence | MNEAMPAAAP VLSLRKLSVD ARTPEGRKPV LQDVSFELAG GETLCIAGES GSGKSVTSLS
IMGLLPKASL RVASGSVLLG ERDLLKLSDR GMRSVRGGDI AMVFQEPMTS LNPVMSVGNQ
LTEAIRAHQG SENAEAVALK MLDAVQITDP ARRLKQYPHE LSGGMRQRVM IAMALSCRPK
VLIADEPTTA LDVTVQAQIL RLMRELKREF GASIILITHD MGVVAEMADR VVIMQNGRIV
EQGTTLAIFQ RPKEAYTQQL LAAVPRLGAF AGTDRPPRIT QRAVETLHPD RTPVLNVRDL
TVTYGNAASR FFKGKPPVAA VDDVSFDILP GETLGLVGES GSGKSTTGKA VLGLIPFKGN
VLIDGRNIAG LSQREMRPVR RSAQMIFQDP YASLDPRMAV GKAIGEPMVI HGIGNHSERQ
DRVAELLRRV GLTPDAATRY PHEFSGGQRQ RICIARALAL EPKLIVADES VAALDVSVRA
RVLDLLLELQ ETMGLAYLFI SHDMAVVERM SHNVAVMRAG RIIETGTRRD IFENPRDDYT
RALIAAVPIP DPEVYRGKEA HA
|
|---|
| |