Gene Rpic12D_4645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4645 
Symbol 
ID8022339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp1305784 
End bp1306122 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content65% 
IMG OID644833422 
Producttranscriptional regulator, AraC family 
Protein accessionYP_002984556 
Protein GI241666197 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0412729 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGCTGT GGCGCCTGCG GCTGGCAACG GCTTATATCG AAGAGAACCT TGGCAGGGCG 
GTCCGGCTGG AAGACGTTGC ACGGGCGACG GGCCTCACGC GCATGCACTT TGCTGCCCAG
TTCCGCGCGG CCACGGGCGT GCGTCCGCAC GCGTATCTTT TGCATCGGCG CATCGAGCGC
GCCAAGACCT TGCTGATGAG ACTGGACGCT ACGGTGGTCG AGATCGCGCT GGAAGTCGGC
TTTCAGAGCC AGGCGCACTT CTCGACGGTA TTCAAGCGGC TCGCGGGCGA TAGCCCGTCG
ACCTGGCGAC GACGCGCGCT GGATCAACTG CATGGCTGA
 
Protein sequence
MPLWRLRLAT AYIEENLGRA VRLEDVARAT GLTRMHFAAQ FRAATGVRPH AYLLHRRIER 
AKTLLMRLDA TVVEIALEVG FQSQAHFSTV FKRLAGDSPS TWRRRALDQL HG