Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4604 |
Symbol | |
ID | 8022292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 1252807 |
End bp | 1253742 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644833376 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002984516 |
Protein GI | 241666157 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | [TIGR03339] aminoethylphosphonate catabolism associated LysR family transcriptional regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGGCG ATCTATTGAT GTCGTTCTTC GAGGTGGCGC GCCAGGGCAG CGTCACGTCG GCCGCCAAGC GCCTGCGCCT GTCCCAGCCG ACCGTGACCG GACGTATCCG CCAACTGGAA GAGATGTACG GCGTGGAACT GTTTCACCGC CGCGGCAGCC GGCTGGACCT GTCCGACCTG GGCGTGAGCC TCATGCCTAT CGTCGAGCGC CTCGCGCAGC AAGAAGGCGA CGTCGATTTT CTCCTGCGCA ATGCCGGCGA TCTGCGCACC GGCAACCTGC GCGTGGGCGC CACGGGCCCG TACTACATCC TGCCCAGCGT GGCGGCGTTT CGCGCACGCC ATCCCACCAT CGAGATCACC ATCGAATTCG GCAACTCGCA GCAGATGCTC GAGGCGCTCT CGGAGGTGCG TATCGACCTG GCTGTTTCGT CTCACGCCGT GGATGACGAA CGGCTGCATC GCATCACGCT GGCCGAAGAC ACGATGGTGC TGGTGGTGCC GCTGGACCAC CCACTTGCAC GTCGCCCGAG CGTCACCCTG GATGACGTTG CCGGCTGCCA ATTGCTGATG CGCGAACCGG GCTCCGTCAC CCGCCGCGTC ACCGAAGACG CGTTTGCCGC GGCCGGCATC GAGCCTGCCA GCACGAGCAT CATCGGCAGC CGGGAAGCCA TTTACGAAGC AGTCAGCCTG GGGCTGGGCT GCAGCATCGT TCCCGCACGT GAAGCACCGC GCCGGCCCGA CGTGCGCGTG CTGCCGTTTG CCGGCAACGC GCCAGTCATT CACGAATACC TGTACTTCCT GAAGGAGCGC AAGGACGCAC GGCTGGTACG CGCGTTTCTT GACCGCCTGG ACCCGCAGTT GGCCCACGCA CCCGAGAAAA AGGCCGATGC GTTCATCGCC AAAGTTATGG CAATGGACAC AGCCGCGACG CGCTAG
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Protein sequence | MLGDLLMSFF EVARQGSVTS AAKRLRLSQP TVTGRIRQLE EMYGVELFHR RGSRLDLSDL GVSLMPIVER LAQQEGDVDF LLRNAGDLRT GNLRVGATGP YYILPSVAAF RARHPTIEIT IEFGNSQQML EALSEVRIDL AVSSHAVDDE RLHRITLAED TMVLVVPLDH PLARRPSVTL DDVAGCQLLM REPGSVTRRV TEDAFAAAGI EPASTSIIGS REAIYEAVSL GLGCSIVPAR EAPRRPDVRV LPFAGNAPVI HEYLYFLKER KDARLVRAFL DRLDPQLAHA PEKKADAFIA KVMAMDTAAT R
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