Gene Rpic12D_4590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4590 
Symbol 
ID8022278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp1236210 
End bp1237376 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content69% 
IMG OID644833362 
Productcytochrome c class I 
Protein accessionYP_002984502 
Protein GI241666143 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGAC CGGAAGCGAC GGTCTGGCTC AACGCGTTGC TTGGCTTTCT GCAATGGGCG 
CAGCACGGCG TGCTGGTGCT GATGCACACG CTTGGGCTGA CCGGCGAGGC ACACGGGCAG
CCGGCATGGC CGTGGGACGT GCGCATCGCG GGCGAAACCC TGTTGATCGA CCTTGGGCAA
GCGCAGCAGC TTGGCCTGAC GCTGATTGCC TTGATGCTGG CGTTGCTGGC CGTCGTGATC
GCCGTGCTCG TGAGGCGGTG GCGGCCGGTG TCATCCGGTG TTGCGGCGGG CCTGCTTGTG
GTGGCGCCGT GGCCCTCGGC GGTTGTGGTG GCGCCCGCCG TGCCGACGAG TTTCCATGTG
AGCCCAACGG CTTTTTCGGT GGCGTCCATC ACGCAGGGCA CGCGCATCTA CAACGCCGCG
TGCGCAAGCT GCCACGGCGC AGACGGCCGG GGCGAAGGCC CCTTGGCCGC CACGCTTACG
CGCTGGCCAC CCACGGTGGT CGGCCCATTG CTTGGCCGTC ATGCCGATGG CGAGCTGTTC
TGGCACATCG CCCACGGCAT GCAGGACACG CAAGGTGCGT CCACCATGCC TGCATTTGCC
GGTCGACTGA GCGATGCCGA TATCTGGGCG GTACTCGACG CCATGAAGGT GCTGGCCGCG
CGTGGCGGCG TGCGCGCCGG CGGCTGGCCG CTGCCGGTGG CGCTGCCCGC GTTGTCCGTG
CGCTGCGGCG ATGCGCTGCC GCAATCCCTG GCGACGTGGC GCAACGGCCA ACGCGTGCGC
GTGGTGGCGG TGGATGCGGC ATCGAGCACC GACATCCCGC TGGAAGATCC GCGTTTCCAG
ACATTGCTGA TCACGCCGGA TGGCAGGTTG CCACCGCCAA CGCGCGCGTT CCAGGCGCGT
TGCGTGGCGA CAGGCGCCGA CGCCTGGAGC GTCTTCGCCG CCATCGCCGG TGCTGCGCCG
CAAGCGTTCT CCGGCACGCA GTTGCTGGCC GACCGCAACG GCTGGTTGCG CGCACGCGGC
GCACCGGGCA CCACGTGGTC CGATGCCGAT TTCCTCTGCA CTTCGGCCGC ACGCGGGACC
GCCCGCAGCA CGAGCGGCCT CGATTCCTTG ATCGCCCGCA TGGACGCCGA ACCCGTGCGC
TATGTGAAAG GCGGCTTCAT CCACTGA
 
Protein sequence
MSGPEATVWL NALLGFLQWA QHGVLVLMHT LGLTGEAHGQ PAWPWDVRIA GETLLIDLGQ 
AQQLGLTLIA LMLALLAVVI AVLVRRWRPV SSGVAAGLLV VAPWPSAVVV APAVPTSFHV
SPTAFSVASI TQGTRIYNAA CASCHGADGR GEGPLAATLT RWPPTVVGPL LGRHADGELF
WHIAHGMQDT QGASTMPAFA GRLSDADIWA VLDAMKVLAA RGGVRAGGWP LPVALPALSV
RCGDALPQSL ATWRNGQRVR VVAVDAASST DIPLEDPRFQ TLLITPDGRL PPPTRAFQAR
CVATGADAWS VFAAIAGAAP QAFSGTQLLA DRNGWLRARG APGTTWSDAD FLCTSAARGT
ARSTSGLDSL IARMDAEPVR YVKGGFIH